Detailed information on CNT30223326


BLAST search results

BLAST vs Swiss-Prot:
sp|A1E9H9|PSBM_HORVU, E-value = 1e-16

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30615871Hordeum vulgareSesamum indicum31.8417.189.4185reverse complement
CNT3098653Hordeum vulgareSolanum tuberosum55.8116.6785.23149reverse complement
CNT30395992Hordeum vulgareTriticum turgidum22.13.2189.8359forward
CNT3087474Hordeum vulgareVigna radiata32.9619.8688.6488forward
CNT3057411Hordeum vulgareAmborella trichopoda37.839.0687.13101forward
CNT30121209Hordeum vulgareCitrus clementina36.718.0187.7698forward

Expression of CNT30223326

Peptides detected in this lncRNA

>peptide 1 (37 aa)
MNSAVAINARILTSITSLFFIFTITRDVIPWRGKRGKV

Sequence

>CNT30223326
CTTTAAGATTCCAACCAGATCCTTTCATTTAAGACTTGAATTTTTTTATTTAATCCCTTTTTCATTTCTTCAATGATTAATTGGAATTCCACTTAATTAT
TTTGGCTGACTGTTTTTACATAAATAATAAGTAAAAAAGAAGTAGGAATTAGAATGAACAGTGCAGTAGCAATAAATGCGAGAATATTGACTTCCATAAC
CTCTTTATTTTTTATTTTCACAATAACTCGGGATGTAATCCCATGGAGAGGAAAAAGGGGTAAAGTG