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Detailed information on CNT30414433


BLAST search results

BLAST vs Swiss-Prot:
sp|P27521|CA4_ARATH, E-value = 1e-91

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30523236Papaver somniferumSetaria italica7.4237.5582.6192forward
CNT30513051Papaver somniferumJuglans regia11.1357.0285.51138forward
CNT30270368Papaver somniferumChenopodium quinoa16.8539.9680.86209forward
CNT30728535Papaver somniferumCorchorus capsularis8.6331.0186.92107forward
CNT30381598Papaver somniferumManihot esculenta27.962.2381.5346forward
CNT30526306Papaver somniferumPhaseolus vulgaris22.930.3183.1284forward
CNT30487770Papaver somniferumOlea europaea18.8751.8881.62234forward
CNT30708791Papaver somniferumGlycine max23.6339.9781.57293forward
CNT3084615Papaver somniferumVigna radiata25.2427.1283.71313forward
CNT30554639Papaver somniferumOryza glaberrima7.4234.7282.6192forward
CNT30171733Papaver somniferumTrifolium pratense21.453881.95266forward
CNT30144644Papaver somniferumMedicago truncatula28.3192.6183.76351forward
CNT30208094Papaver somniferumHelianthus annuus8.8746.2286.36110forward
CNT30626732Papaver somniferumDaucus carota32.8232.5182.06407forward
CNT30573808Papaver somniferumVitis vinifera22.3443.5581.59277forward
CNT3038035Papaver somniferumCucumis melo16.3741.1879.31203forward
CNT30723301Papaver somniferumLupinus angustifolius10.2429.7484.25127forward

Expression of CNT30414433

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MHNRLTQKYTVDKFMVMYLPVRYPGDAKPGNH*

>peptide 2 (54 aa)
MNSITKRVEFEAKYSAFPASYHSGTLMIPIFVKSSGNNIPATPNIAHRPLTSSA*

Sequence

>CNT30414433
CGATTATGCTCGCAAGATCTTGATCAAGTGCCAAATACCAAACAGCAAAATAGATAGTAAAAATAGATTGAACTAATAAGATAAGAAAAAATAACATCTT
AGTTCCCCTGTACATTGATTGGAGGTCTTTTGCTTTTCACTTTTCTACATTGAAGCTCATTTCATACAAAACCCAAACTACTGAATATAATTGTTACAAA
GGCAGACATAAAATCATCCCCATTTTTCGACGAATTACGTGCTCACTTGAATAGCTGAATGATGGTGTTGCCCTAGGTTATCTAAAGGTCCTTTCCCAGT
CACATTGTGCTGTACAACAAATCCCAAGAATGCCAACATTGCCAATCTTCCTGCAAAACCAACAATAAAAAAAACACTTGTTAGTATGACCTAAGCCAAT
CTATCAAAATTTGTCCATGTTCTTTTTTTCTTGAATTAGTGTTCAAAAATGGTAGTGAATCTTATTACCGTTGGCGACTTCTTTCTCCTTGGCCTCTTCG
GTAGCTGAGAAGTTGAGTGGGTTAAAGATACCACCGGGATATCCAACCTCACCTTTAGGCAAACTGTAGCTCTTAAAGATGGGATCTTGGTTAACGCTTC
CTGGGTTCTTAATATCTTGCCACCTTCTGATTTCTACGTAGTGGAACAAGATGAATTCAATCACAAAGAGAGTCGAGTTTGAAGCGAAGTACTCAGCTTT
CCCGGCATCATACCATTCTGGAACGTTAATGATCCCAATCTTTGTGAAGAGCTCTGGTAACAACATTCCTGCAACACCCAACATAGCCCATCGTCCATTG
ACGAGCTCAGCTTGAACGAACCATTTCAAGTTCTCGGGGTCCTCAGCAAGTCCAAGAGGATCGAATCCGTTGTCACCGGGAAGACTACAATAACAAAAAA
ATTATTATTCAGTACCAAACCACTGTATTCATGCATAATCGTTTAACTCAAAAGTACACGGTTGATAAATTCATGGTTATGTACCTGCCAGTAAGGTATC
CGGGCGATGCCAAACCAGGCAACCACTGACCCTTCTTAGCTTCAATTTTGAAGGACTTTGACGATGTTGAAGTTACGGTTTTAACAGAGACTTCCCTTGT
GAGTTTGCCGGAGGAGCCACTGAGGAACCGTGACTTTGATGCGCATGGCCGGAAGACGGCAAGTGATGCTTGTGTTGTGACGGTAGACATCTCCCTGATT
TGGATTCCAAAAACTGAAATGGATCTTCGCCAAGGGTATT