Detailed information on CNT30172987


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3070208Trifolium pratenseQuercus suber2327.0691.369reverse complement
CNT30381728Trifolium pratenseManihot esculenta23.6723.0591.5571forward
CNT30403379Trifolium pratenseBeta vulgaris20.3319.8190.1661forward
CNT30644641Trifolium pratenseCannabis sativa2318.5589.8669forward
CNT3058749Trifolium pratenseAmborella trichopoda18.3320.1590.9155forward

Expression of CNT30172987

Peptides detected in this lncRNA

>peptide 1 (52 aa)
PSWVTPACNPCGGIKVVEHGLGFDXXXXXXXXXXXXXXXXXXXXPKRKLESP*

Sequence

>CNT30172987
GCCGAGTTGGGTAACTCCAGCTTGTAACCCATGTGGGGGCATCAAAGTGGTTGAACATGGCTTAGGATTTGACNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGACCTAAGCGAAAGCTTGAGTCTCCTTGATTCTAGACTAGAGGGTACTGTGTGAGGCTGGTTTCACAGA
GCAGCGAATACCTCTGGCTCTTGACAGTGGAGGGATAACAAGCTGCAGCACTTCTAGCTCACATTGCCTGGCAAGCCTAGCCACTTGAACCACCACTTTT