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Detailed information on CNT30525199


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9LI74|CHUP1_ARATH, E-value = 2e-23

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30628834Phaseolus vulgarisVigna unguiculata84.693.0892.95511forward
CNT30171601Phaseolus vulgarisTrifolium pratense42.0544.4180.31254forward

Expression of CNT30525199

Peptides detected in this lncRNA

>peptide 1 (69 aa)
MHYLLRKPKVLKYLSLPLFSSMTDKIQLAVELCELCHHLLPLLIGFLGEEEGEEVVEQMVLHWKDLHLW*

Sequence

>CNT30525199
CTCCTAGCATCAGATGCATTACTTGTTGAGGAAACCAAAAGTGTTGAAGTATCTTTCTTTGCCTCTCTTTTCATCAATGACTGATAAAATTCAACTAGCT
GTGGAGCTCTGTGAACTTTGTCACCATCTACTCCCCCTCTTGATAGGCTTCCTGGGGGAGGAGGAGGGGGAGGAAGTGGTGGAGCAGATGGTACTCCATT
GGAAGGATTTGCATTTGTGGTAGCACCACCACCACCACCACCAGATGGCTTAGGAGGAGGCCTAGGCACCCTAGTAGGCCTTTTCTCAAAGTGAGCAAGC
TTCATCTTGCTAATGGTTTGATCATCAGCCTCCTTTCCATCTTCAGATTTATCATTTGGAGTGCCAGAAACAACTGGTTTCTCCTTTATTTGAGTAAGCT
TTGGTGGCAAAGATATAGGAATTCCTCTTTCAGCCTTGCTCATACTCAAACCTGAATTGTCACCAAACTTCTGCACTCTTGCTTTCTCTGCTTTTTCTTT
GATTTGTTTTTCCCTTGCCAAGGCCAACTTGTGGCGATCTTTATAAGCAGGGTACTTCTCATCCATCAATCCATCAACTGACTTAGACATCAATTGGAAT
GAAG