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Detailed information on CNT30120686


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30535409Citrus clementinaEucalyptus grandis28.930.3190.887forward
CNT30547454Citrus clementinaIpomoea triloba26.2524.0986.0879reverse complement
CNT30515285Citrus clementinaJuglans regia28.911.4989.6687reverse complement
CNT30703316Citrus clementinaQuercus lobata24.9224.4393.3375reverse complement
CNT30376783Citrus clementinaArabidopsis thaliana27.579.4287.9583reverse complement
CNT30501219Citrus clementinaCoffea canephora29.928.3987.7890forward
CNT30727469Citrus clementinaCorchorus capsularis36.5436.1889.09110reverse complement
CNT3070208Citrus clementinaQuercus suber28.5733.7389.5386forward
CNT30381752Citrus clementinaManihot esculenta36.8836.2786.49111reverse complement
CNT30406606Citrus clementinaBeta vulgaris26.9126.2192.5981reverse complement
CNT30526259Citrus clementinaPhaseolus vulgaris34.2233.7788.35103reverse complement
CNT30629861Citrus clementinaVigna unguiculata26.2516.6788.6179reverse complement
CNT30506943Citrus clementinaNicotiana attenuata30.930.4987.193reverse complement
CNT30708521Citrus clementinaGlycine max33.5533.2286.14101reverse complement
CNT3044357Citrus clementinaPrunus dulcis25.9125.6694.8778reverse complement
CNT30158948Citrus clementinaPistacia vera81.7369.384.96246forward
CNT30561829Citrus clementinaActinidia chinensis27.2422.9791.4682reverse complement
CNT3086859Citrus clementinaVigna radiata34.8834.7787.62105reverse complement
CNT30544072Citrus clementinaBrassica napus35.2235.187.74106reverse complement
CNT30238127Citrus clementinaBrassica oleracea35.2234.7586.79106reverse complement
CNT30172422Citrus clementinaTrifolium pratense22.9221.8488.4169reverse complement
CNT3061339Citrus clementinaArabidopsis lyrata36.8836.2785.59111reverse complement
CNT3081558Citrus clementinaBrassica juncea41.215.4884.68124forward
CNT30264180Citrus clementinaBrassica rapa35.2235.187.74106reverse complement
CNT30652801Citrus clementinaRosa chinensis26.9126.4791.3681reverse complement
CNT30215606Citrus clementinaHelianthus annuus27.2426.8986.5982reverse complement
CNT30128358Citrus clementinaCorymbia citriodora26.9129.3587.6581forward
CNT30715507Citrus clementinaMalus domestica golden29.929.1387.7890reverse complement
CNT30479039Citrus clementinaArabidopsis halleri36.5435.9585.45110reverse complement
CNT30644781Citrus clementinaCannabis sativa29.938.6391.1190forward
CNT3026903Citrus clementinaPopulus trichocarpa27.5727.390.3683reverse complement
CNT30174907Citrus clementinaVigna angularis33.8933.4487.25102reverse complement
CNT30724433Citrus clementinaLupinus angustifolius22.5922.3788.2468reverse complement

Expression of CNT30120686

Peptides detected in this lncRNA

>peptide 1 (73 aa)
KSVCSIERDHPGMSGLTGNRPVIHPLTRAGGCRCSVKPASRCTLHFRSQASQAFAQPTWTTLYLDWASPFKTQ*

Sequence

>CNT30120686
AAAAGTGTTTGTTCTATTGAGAGGGACCATCCAGGTATGAGCGGACTGACTGGGAACCGACCCGTTATCCATCCACTGACGAGAGCGGGAGGTTGTCGCT
GCTCTGTGAAACCAGCCTCACGCTGTACCCTCCACTTTAGGAGCCAAGCGAGCCAAGCCTTCGCTCAGCCCACGTGGACCACTCTTTACTTGGATTGGGC
GAGTCCGTTTAAGACCCAGTAAGCCCAACCTGCAGAGTCCAGCCAACGTTCAAACACTTTGATGCCCCACTTGGTTACAGGCTCGCGTTACTGAGCCCGG
T