Detailed information on CNT30341750


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30675703Eragrostis tefSetaria viridis44.4685.7787.55241forward
CNT30523536Eragrostis tefSetaria italica102.2198.0583.94554forward
CNT30316024Eragrostis tefCorylus avellana42.4428.5782.61230forward
CNT30490956Eragrostis tefOlea europaea48.5262.6280.99263forward
CNT3042412Eragrostis tefPrunus dulcis67.949.6681.25368forward
CNT30193210Eragrostis tefSecale cereale39.4810088.79214forward
CNT30304911Eragrostis tefTriticum aestivum57.3852.0189.39311forward
CNT3088022Eragrostis tefVigna radiata52.9566.4480.84287forward
CNT3016764Eragrostis tefZea mays99.0895.5581.94537forward
CNT30688491Eragrostis tefTriticum urartu75.0995.0986.98407forward
CNT30366570Eragrostis tefSorghum bicolor96.6885.6285.69524forward
CNT30154878Eragrostis tefPrunus persica62.3666.2781.36338forward

Expression of CNT30341750

Peptides detected in this lncRNA

>peptide 1 (53 aa)
MRVMSGCMRVMSDCMKEMSGCMMGMWGCMKEMWDYNSVRWGCSLAMLDYSSEM*

>peptide 2 (56 aa)
CSSEKSDCMDSSLGCLESKHAKDCTWLMKDCSLVKLDCSSAKLGCNLVMSGCNQEK*

Sequence

>CNT30341750
CTGTAGTTCGGAGAAGTCTGACTGTATGGACTCATCCTTGGGCTGCTTGGAGAGTAAGCATGCGAAGGACTGTACTTGGCTGATGAAGGATTGTAGCTTG
GTGAAGTTGGACTGTAGTTCGGCGAAGTTGGGCTGTAACTTGGTGATGTCGGGCTGTAACCAGGAGAAGTAGGGCTGTATGCAGGCGATGTAGGGCTGTA
TGAGGGTGATGTAGGGCTGTATGAGGGTGATGTCGGGCTGTATGAGGGTGATGTCGGACTGTATGAAGGAGATGTCGGGCTGTATGATGGGGATGTGGGG
CTGTATGAAGGAGATGTGGGACTATAACTCGGTGAGGTGGGGCTGTAGCTTGGCGATGTTGGACTATAGCTCGGAGATGTAGGGCTGTAACTTGGTGATG
TGGGCGAGTATGACGGACTGGTGGGTGAGTATGATGGACTTGTTGGCGAGTAAGTCGGACTTGTTGGGCTATATGTAGGAGAGCCTGGTGTATATGATGG
TGAGGTTGGACTATAGTTTGGTGACGCAGGGCTATATCCAGG