Detailed information on CNT30154709


BLAST search results

BLAST vs Swiss-Prot:
sp|P50156|TIP11_ORYSJ, E-value = 3e-17

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30678075Prunus persicaSetaria viridis25.0815.487.3479forward
CNT30712512Prunus persicaGlycine max20.3216.6287.564forward
CNT30706776Prunus persicaPrunus avium86.9898.5694.89274forward
CNT30331222Prunus persicaDioscorea rotundata31.1112.4885.7198forward
CNT30113848Prunus persicaFicus carica31.1112.6991.8498forward

Expression of CNT30154709

Peptides detected in this lncRNA

>peptide 1 (47 aa)
MPRRREILPPTKISVEMNSARPALKASGWYASSGRPTAMFRIGIVGG*

Sequence

>CNT30154709
GCCAGAAAGTGATAAAATTACCTGGTAGTTGGTTGCGAACCTGAGGAGACCGCACGCGACGGCGGACCCGAGGAGCTGGGCGATCCAATAGAGGATGCCG
CGGAGGAGGGAGATATTGCCGCCGACGAAGATCAGCGTGGAAATGAACTCGGCGAGACCCGCCCTCAAGGCGTCCGGGTGGTACGCCTCCTCGGGTCGGC
CAACGGCAATGTTCCGGATCGGCATCGTCGGAGGATGATTAAGATCGGACGGTGGAGATTCGCTGCAGAATTAAGCTGCGTACGGTCGCTCACAAACTAC
TTCACTCTTGGCTCA