Detailed information on CNT30706776


BLAST search results

BLAST vs Swiss-Prot:
sp|P25818|TIP11_ARATH, E-value = 6e-18

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30677491Prunus aviumSetaria viridis20.516.4791.2357forward
CNT30712512Prunus aviumGlycine max28.0620.2685.978forward
CNT3042354Prunus aviumPrunus dulcis98.5646.2196.72274forward
CNT30154709Prunus aviumPrunus persica98.5686.9894.89274forward
CNT30331222Prunus aviumDioscorea rotundata36.6912.9987.25102forward
CNT30113848Prunus aviumFicus carica35.6112.8292.9399forward

Expression of CNT30706776

Peptides detected in this lncRNA

>peptide 1 (47 aa)
MPRRREILPPTKISVEMNSARPALKASGWYVSSGRPTAMFRIGIVGR*

>peptide 2 (91 aa)
LVVGDELEEPAGDGGPEELGDPVEDAAEEGDITADEDQRGDELGETRPQGVRVVRLLGSANGNVPDRHRRKMIKIGRWRFAAELSCVWSLTT

Sequence

>CNT30706776
CTGGTAGTTGGTGACGAACTTGAGGAGCCCGCAGGCGACGGTGGCCCCGAGGAGCTGGGCGATCCAGTAGAGGATGCCGCGGAGGAGGGAGATATTACCG
CCGACGAAGATCAGCGTGGAGATGAACTCGGCGAGACCCGCCCTCAAGGCGTCCGGGTGGTACGTCTCCTCGGGTCGGCCAACGGCAATGTTCCGGATCG
GCATCGTCGGAAGATGATTAAGATCGGACGGTGGAGATTCGCTGCAGAATTAAGCTGCGTATGGTCACTCACAACTAC