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Detailed information on CNT30150723


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30221338Brachypodium distachyonHordeum vulgare22.4429.8891.09101forward
CNT30553989Brachypodium distachyonOryza glaberrima40.6725.3580.33183forward
CNT30454148Brachypodium distachyonSaccharum spontaneum22.6711.3892.16102forward
CNT30136388Brachypodium distachyonLolium perenne39.3315.3187.57177forward
CNT30576752Brachypodium distachyonOryza barthii22.447.4492.08101forward
CNT30581043Brachypodium distachyonEchinochloa crusgalli2615.681.2117forward

Expression of CNT30150723

Peptides detected in this lncRNA

>peptide 1 (34 aa)
FNYSSFHRPRSLYSYITPLNTQALLTLFLHGNTH*

Sequence

>CNT30150723
GTTTAATTATAGTTCCTTCCACAGGCCTCGCTCACTTTATTCTTACATAACACCACTGAACACACAGGCCTTACTCACTTTATTCTTACACGGGAACACA
CACTGAGCACTGATCACTAAGCATAGGACTTGATGTAGGTGCCGTAGTTGCTCTGCTTGTCGAAATATCTGTCCCAGAGCATGACGCCGCCGTAGTTCTC
CTTCTTCTGCACCACCGGCGTGACGCCATAGAAGACGTTCTTTGGGTGCACCCACTGGTGGGACTTATCCTCCGCCGTAAGCCCGATGTAGAACCTGGTG
GCCGGGTACGCCGCCGTCCACTTGTCGATGCCGTCAAGCCACGCGTCGCCGAAGGGGCGGTACACGCCGGGCTTGGAGCCGCCGAAGTAGGAGTTCCAGA
GGTAGTCGAAGAGGTCGAGCGCCGCCTTGCTCGACGGGAGGGAGTAGGAG