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Detailed information on CNT30136388


BLAST search results

BLAST vs Swiss-Prot:
sp|Q8L5C6|XIP1_WHEAT, E-value = 1e-154

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30150723Lolium perenneBrachypodium distachyon15.3139.3387.57177forward
CNT30101724Lolium perenneOryza rufipogon16.4422.0783.16190forward

Expression of CNT30136388

Peptides detected in this lncRNA

>peptide 1 (45 aa)
MLCLASSSASTSYRSAGVPCSRKRSTPSSHASPKGRWTPLAVPSM*

>peptide 2 (30 aa)
MERKTRMLLDWQYLMSAPTVETSWPERSRW*

Sequence

>CNT30136388
TAGTATTAGGGGAAGGCCAACATTTTGTTTCGGGTTTTTTTAGCTAACTTTTTTCTTTCCTTAAATGGCGCGGGCTTTATTAATTTTAAATCTGACAACT
CATGTCTTTTATCTAAAACCAGAGGATTAAACCATAACCTGTATATTCACAGGTCTCACTTTATTCTTACAATTACCACAAACACCACAATTTATTGTTA
CACCACTAGGAAACGACGCGATGCAGGATGTAGCTGAGTAGCTCAAGCGTAGCTCTTGATCAAGCTACCGTAGTCGTCGCTCTTCTTGTCGAAGTACCTG
TCCCAGAGCATGATTCCGCCGTAGTTGTCCTTCTTCTGCACCACGGGCGCGACGCCGTAGTAGACGTTCTTGGGGTGTATCCACTGGTACGAGTTCTGGT
CCGCCGTGAGGCCGATGTAGAACCTGGTGGCCGGATACGCCGCCGTCCACTTGTCCCACGCGTCCTGCCACGCCCCGTACACGTTGCACGCCTTGTCGTC
CCCCTCGTAGATCCTGACGTGGACGCGCTCGAAGATCCCCGTCGCCAGCGCCCGCCCGACGTGCGCCGCCGGTGGGTACGCGCACCGGACCGTCGCCGTC
AGGTGCAGCGGCTTGCCCGGCCCGCCGCGGATGTTGTGCTTGGCCAGCTCCAGCGCCAGCACGTCGTACCGGTCCGCGGGCGTGCCGTGCTCGAGGAAGA
GGTCGACGCCGTCGAGCCACGCGTCGCCGAAGGGGCGGTGGACGCCCTTGGCGGTGCCGAGCATGTAGGCGTTCCAGAGGTAGTTGGCGAAGTCCGCCGC
CGCCTGGGGGCTGGGCAGGGAGTACTGGTTGCCGAAGCCGCCGATGGAGAGGAAGACGAGGATGCTCTTGGACTGGCAGTACTTGATGTCGGCGCCGACG
GTGGAGACGTCGTGGCCGGAGAGGTCGAGGTGGTAGTTGCCGTGGCCGAAGACGTCGAGGAAGGAGATGACGGCGATGGTGTAGGTGCCGGTGTCGCAGG
CCTCACGCAGGGAGCCCTCGTCCTTGTTCCGGCCCCAGAAGACGGCCACCTGGCCGGAGGGCCCCGAGGAGGAGCATCACGGAGGCTGGCTTACAGCTTG
CGATCGCCATCGGTGGTGGATGGATGAGTTCTCTTCCTTGCTCGGCTTGTTGGTGT