Detailed information on CNT301349


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30695632Zea maysOryza sativa21.857.0987.8866forward
CNT30523279Zea maysSetaria italica79.1435.7290.38239forward
CNT30554639Zea maysOryza glaberrima18.2120.7592.7355forward
CNT30354352Zea maysEragrostis tef59.648.7885180forward
CNT30584554Zea maysEchinochloa crusgalli27.1538.1495.1282forward

Expression of CNT301349

Peptides detected in this lncRNA

>peptide 1 (99 aa)
LGLERGREVERVEDAARVGGGGKAGEPLALGLRLEAAPRGRRGAAEAARVAKEGRRRLERCRRRAKGRYRGAGGDGRHASRGLGARRWMEWRREIKHVGF

Sequence

>CNT301349
CTTGGCCTCGAGCGTGGGCGCGAAGTTGAGCGGGTTGAAGACGCTGCCCGGGTAGGAGGGGGAGGGAAGGCCGGGGAGCCACTCGCCCTTGGCCTCCGCC
TTGAGGCTGCGCCTCGTGGGAGACGCGGTGCGGCCGAGGCGGCTAGAGTGGCCAAGGAAGGCCGACGACGACTTGAGCGATGCCGACGACGGGCGAAGGG
CCGCTACCGGGGCGCGGGCGGTGACGGACGCCATGCTTCCCGGGGACTGGGAGCGAGGAGATGGATGGAGTGGCGGAGGGAGATCAAGCACGTTGGTTTT
TT