Detailed information on CNT30354352


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT301349Eragrostis tefZea mays48.7859.685180forward
CNT30584554Eragrostis tefEchinochloa crusgalli18.732.0992.7569forward

Expression of CNT30354352

Peptides detected in this lncRNA

>peptide 1 (31 aa)
GDGRPGSHSPLASALRLRLVVADDTRPRRLE*

>peptide 2 (59 aa)
GWEAGEPLALGLRLEAAPRRRRRHAAEAARVTEEGRVERRRRAQGRDRGAGGDGRHGWL*

Sequence

>CNT30354352
GGGGATGGGAGGCCGGGGAGCCACTCGCCCTTGGCCTCCGCCTTGAGGCTGCGCCTCGTCGTCGCCGACGACACGCGGCCGAGGCGGCTAGAGTGACCGA
GGAAGGACGAGTTGAGCGACGCCGACGGGCGCAGGGCCGCGACCGGGGCGCGGGCGGTGACGGACGCCATGGCTGGCTGTAGCTTCTTCCCGAGTGAGTG
AGGGAGTGAGCAGACGGGGTGGCCGACACGTTCGTTTTAGCCGGCAGCGGCAGCGTGGTTTGTCTTAAACTCCCGGCGAGCGGCGGGTGCGTGGCCAGGA
GGCTCCGGCCGCGACGGACGGCGTAGATTGGCCACGCTGTTTGATCGGACGGACCAAATGCCGGCCGAG