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Detailed information on CNT30523279

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT301349	Setaria italica	Zea mays	35.72	79.14	90.38	239	forward

Expression of CNT30523279

Peptides detected in this lncRNA

>peptide 1 (65 aa)
MYVLLSPSAHQIGDHSPSTQPEKVWMMVLCHGSDRCCSRLSKGPLPVTLCWIRNPRNASMASLPA*

>peptide 2 (41 aa)
TVLNLLSGLNTHHKLMIHTERNSHRSRINVCPPVPISPPNW*

>peptide 3 (38 aa)
MVSKHLKLPADGDRVVTGSDATHRWRAPSPWPRAWARS*

Sequence

>CNT30523279
ACAGTCCTTAATCTCCTCTCCGGATTAAACACACATCACAAACTGATGATCCACACAGAAAGGAATTCACATCGATCGCGTATCAATGTATGTCCTCCTG
TCCCCATCAGCCCACCAAATTGGTGATCACTCCCCGTCGACTCAACCGGAGAAAGTCTGGATGATGGTGTTGTGCCATGGGTCGGACAGGTGCTGCAGCA
GGTTGTCGAAGGGCCCCTTGCCGGTGACGTTGTGCTGGATCAGGAACCCCAGGAACGCCAGCATGGCCAGCCTCCCTGCATGAACAGGCACATCACATCC
GGATATGGTTAGTAAACATTTAAAGTTGCCGGCGGACGGCGACCGTGTAGTCACGGGATCAGACGCTACTCACCGTTGGCGAGCTCCTTCTCCTTGGCCT
CGAGCGTGGGCGCGAAGTTGAGCGGGTTGAAGACGCTGCCGGGGTAGGCGGGGGAAGGGAGGCCGGGGAGCCACTCGCCCTTGGCCTCCGCCCTGAGGCT
GCGCCTCGTCGGCGCAGCGGCGCGGCCGAGGCGGCTAGAGTGGCCGACGAAGGCCGACGACCTGAGCGACGCCGACGGGCGCAGGGCCGCGACCGGGGTG
CGGGCGGTGACGGACGCCATGCTTCGCGGTGAGATGGGAGTGGCAGAGGAATGGAGAGGAAGAGCACGT