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Detailed information on CNT30695632


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9SQL2|CB24_PEA, E-value = 1e-64

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30513114Oryza sativaJuglans regia10.8534.9585.15101forward
CNT30728535Oryza sativaCorchorus capsularis10.3127.8382.2996forward
CNT30487770Oryza sativaOlea europaea13.8628.681.4129forward
CNT30138628Oryza sativaLolium perenne18.5836.7393.64173forward
CNT301349Oryza sativaZea mays7.0921.8587.8866forward
CNT30205828Oryza sativaHelianthus annuus9.2422.3487.2186forward
CNT30684486Oryza sativaTriticum urartu12.3553.7494.78115forward
CNT30347972Oryza sativaEragrostis tef17.5120.0795.71163forward
CNT30596737Oryza sativaOryza meridionalis43.7266.9496.56407forward
CNT30370926Oryza sativaOryza glumipatula49.4137.4398.91460forward
CNT30150529Oryza sativaBrachypodium distachyon13.2130.5285.37123forward
CNT30102863Oryza sativaOryza rufipogon97.7490.4699.34910forward
CNT30577292Oryza sativaOryza barthii49.4141.4498.7460forward

Expression of CNT30695632

Peptides detected in this lncRNA

>peptide 1 (37 aa)
MHTPQKKKEETRREHLPSPNHRFHQPELIKLLEMPWP*

>peptide 2 (37 aa)
PSPMHPDPCMQETITTTHTVSLNLITSISLSLLPPIH*

>peptide 3 (62 aa)
MMVLCHGSDRCCSRLSKGPFCVTLCCTRNPKNASIASLPATTTSTKIQNNGVVSLYAALLFF*

>peptide 4 (91 aa)
LTHASRSMHAGNNYHNTHSKSESHHIHLSLSPPPNSLTSYTCILHKKKKKKQEENIFHRPIIGFTSLNSSSSLRCPGPDEIDHTLSLTASG*

>peptide 5 (35 aa)
MASFHCMLLFFSSDILIESYRWRAPSPWPRGWARS*

Sequence

>CNT30695632
CCCTCACCCATGCATCCAGATCCATGCATGCAGGAAACAATTACCACAACACACACAGTAAGTCTGAATCTCATCACATCCATCTCTCTCTCTCTCCTCC
CCCCAATTCATTAACATCTTATACATGCATACTCCACAAAAAAAAAAAGAAGAAACAAGAAGAGAACATCTTCCATCGCCCAATCATCGGTTTCACCAGC
CTGAACTCATCAAGCTCCTTGAGATGCCCTGGCCCTGATGAAATCGATCACACGCTCAGCCTGACAGCGTCTGGATGATGGTGTTGTGCCACGGGTCAGA
CAGGTGCTGCAGCAGGTTGTCGAAGGGCCCCTTCTGCGTCACGTTGTGCTGCACCAGGAACCCCAAGAACGCCAGCATCGCCAGCCTCCCTGCAACAACA
ACATCAACAAAAATTCAGAACAATGGCGTCGTTTCATTGTATGCTGCTCTTCTTTTCTTCTGATATATTGATAGAATCGTACCGTTGGCGAGCTCCTTCT
CCTTGGCCTCGAGGGTGGGCTCGAAGTTGAGGGGGTTGAAGACGCTGCCGGGGTAGCCGCACTCGTGCGGCGGGAGGCTGTAGCTCTTGAAGATGGGGTC
CTGGTTGACGCAGCCAGGGTTCTTGATGTCCTGCCACCGCCGGATCTCCACGTAGTGGAACAGGATGAACTCGATGACGAACAGCGTCGACGACGACGCG
AAGTAGGTGGGAGAAGGGAGGCCGGGGAGCCACTCTCCCTTGGCCTCCGCCCGAACATTACGCCTCGTAGTCGGTGCGCGGGCGAGGCGGGTGGAGGATT
GCCCTAGGAAGGTAGACTTGAGCGACGCCGACGAGCGGAGGGCTGCGACCGGGGTGCGGGCGGTGACGGACGCCATGGCTTAGCTTCCCCGGCTTAGAGA
GGGGAGGAAGCGAAGCGGGTGTAGTCACAAG