Detailed information on CNT30554639


BLAST search results

BLAST vs Swiss-Prot:
sp|P27521|CA4_ARATH, E-value = 6e-44

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30513114Oryza glaberrimaJuglans regia38.1134.9585.15101forward
CNT30728535Oryza glaberrimaCorchorus capsularis36.2327.8382.2996forward
CNT30381598Oryza glaberrimaManihot esculenta36.2317.2784.3896forward
CNT30526306Oryza glaberrimaPhaseolus vulgaris32.839.2888.5187forward
CNT30487770Oryza glaberrimaOlea europaea48.6828.681.4129forward
CNT30709355Oryza glaberrimaGlycine max40.7515.5289.81108forward
CNT30564637Oryza glaberrimaActinidia chinensis60.7514.1487.58161forward
CNT3084615Oryza glaberrimaVigna radiata32.837.5487.3687forward
CNT30138628Oryza glaberrimaLolium perenne65.2836.7393.64173forward
CNT301349Oryza glaberrimaZea mays20.7518.2192.7355forward
CNT30205828Oryza glaberrimaHelianthus annuus32.4522.3487.2186forward
CNT30626732Oryza glaberrimaDaucus carota48.310.2287.5128forward
CNT30356968Oryza glaberrimaLactuca sativa32.459.9483.7286forward
CNT30414433Oryza glaberrimaPapaver somniferum34.727.4282.6192forward
CNT30573808Oryza glaberrimaVitis vinifera37.3615.5787.8899forward

Expression of CNT30554639

Peptides detected in this lncRNA

>peptide 1 (86 aa)
LLLLGLEGGLEVEGVEDAAGVAALVRREAVALEDGVLVDAARVLDVLPPPDLHVVEQDELDDEQRRRRREVGGLAGVVGGRREAGEP

Sequence

>CNT30554639
AGCTCCTTCTCCTTGGCCTCGAGGGTGGGCTCGAAGTTGAGGGGGTTGAAGACGCTGCCGGGGTAGCCGCACTCGTGCGGCGGGAGGCTGTAGCTCTTGA
AGATGGGGTCCTGGTTGACGCAGCCAGGGTTCTTGATGTCCTGCCACCGCCGGATCTCCACGTAGTGGAACAGGATGAACTCGATGACGAACAGCGTCGA
CGACGACGCGAAGTAGGTGGCCTTGCCGGCGTCGTAGGTGGGAGAAGGGAGGCCGGGGAGCCACT