Detailed information on CNT3054194


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30317557Amborella trichopodaCorylus avellana1.620.6384.6291forward
CNT30504332Amborella trichopodaNicotiana attenuata1.423.3286.2580forward
CNT30163276Amborella trichopodaPistacia vera2.0938.6485.71119forward
CNT30287172Amborella trichopodaTriticum aestivum2.2651.1981.4129forward
CNT30224613Amborella trichopodaHordeum vulgare1.939.8583.33108forward
CNT30565299Amborella trichopodaActinidia chinensis1.434.1988.7580forward
CNT30590280Amborella trichopodaMusa acuminata2.1924.0884125forward
CNT30435838Amborella trichopodaAegilops tauschii0.8820.089050forward
CNT30680173Amborella trichopodaTriticum urartu0.8820.589050forward
CNT3024497Amborella trichopodaPopulus trichocarpa1.042191.5359forward
CNT30120255Amborella trichopodaCitrus clementina1.4928.8185.8885forward

Expression of CNT3054194

Peptides detected in this lncRNA

>peptide 1 (53 aa)
MNLWLLPFVSENAACIPFQAQRPLPTKTIVLKIQMYNNISDLYSELQLIEKRF*

>peptide 2 (51 aa)
MHLVLTLFEPFHHPSSANGTKALHHHVKHSSSERKLPRQKKPEGHCRVDVPT

>peptide 3 (95 aa)
MCLSTQPEQLVSNTPSNPFSSPLSPSLPPSLSFFHLSNFQYNTPKFSITSKQFHKHFQSPQPLLQIHTNLLSPWLGFSNIEDEDPTRDRLLRSLQ*

>peptide 4 (77 aa)
MQKASKGGDKDDSINPKASRVMIPHCPGPFSLFNFEKHLSLSLSLLLYSHGMHRSIYKNKALLMIKHHHQTFTIIDG*

>peptide 5 (63 aa)
MFLLNLTLNIYFLFFIFNNVLNHFFVSTILGTTWTELLGLGQSTVIGHVLEYSTRAVSFQHSL*

>peptide 6 (53 aa)
MTRSWKVPMARSLVILLTNIKLDENDGITELQSYEIWRRNSSYQHYVQESMNH*

>peptide 7 (30 aa)
MTPFKGNHAIFSQCVCKMTNAKGQQRWGQR*

>peptide 8 (31 aa)
MMKESGLDGLIREIKPLSLRQMMREWIRDRK*

>peptide 9 (33 aa)
MLTVPIIIAFSLITSIFMRFKYHLDVLPTHQQG*

>peptide 10 (33 aa)
MLTVPIIIAFSLITSILMRFKYHLDVLPTHQQG*

>peptide 11 (37 aa)
MKAVLLVSGNEEERSCVEEKPFCYLVDGNDQRFLQKF*

>peptide 12 (43 aa)
MEGKEIRKRFERSGGVTWRGLERIEGCVAQGRGHGGKGDMTKI*

>peptide 13 (50 aa)
MKKNDRVWKKNHFVTWLMVMINAFFRNFEIEIYDFISIYVSNFRFSKERT*

Sequence

>CNT3054194
GCGGAATTATCTTGACTGACAATAAAAGTCTTATTCTCCTGATTAATAAATATAGTCCATGAGATAGTCTTCCTTCATCAATCTTCTTCCCCATGACACG
GTCTTGGAAAGTCCCCATGGCCCGGTCTTTAGTAATTTTACTAACAAACATCAAGTTAGATGAAAATGATGGCATAACAGAACTTCAGAGTTACGAGATT
TGGAGAAGAAATTCATCCTACCAACATTATGTACAGGAATCAATGAACCATTAGCAATAGACACATTGTTAATATTTTTCTTGTTTTTGAAGTTGGATAG
ACTATGATTTGTGGCCCCTGAGTCTATTATCCAAGGAAAAGTGTCGCTAGAAGACATGAAAGCAGTGCTACTTGTGTCTGGGAATGAAGAAGAACGATCG
TGTGTGGAAGAAAAACCATTTTGTTACTTGGTTGATGGTAATGATCAACGCTTTCTTCAGAAATTTTGAAATTGAGATTTATGATTTTATTTCTATTTAT
GTGTCTAACTTTAGATTTTCCAAAGAGAGAACGTGAAACGGTTTTCCACCAAGCAAGATAATTAAGTCCGTTTAAAAGAACAATAGTAAGTTTCATGCTA
GAGTTATGTTCTGAATTTGTCATTATAAAGAAAAATCGGGAACCAGAAGACTGACTTGATCAATAGCAAGAGCGATAAAAGAATGGAAGTCCTTCAATCA
GAACTGATCGAAGATCCCAATGAGAATTATAATTCATCTCTCTAGAAATTGTCGATGTGCATACAACTGCCAGTGAATTAATGCTTACAGTGCCAATAAT
AATTGCTTTCTCTCTCATCACCTCGATTCTTATGCGATTCAAATATCATTTAGACGTGCTTCCAACACATCAACAAGGATGAGAGGTACGGCAAGTCCGC
ATCAATAACTTGGTCGACTTGAGGGGAGCACAAAACGTTACCGTTCGCAAGAGAGCCATTTGCAACAGATTTGCATTGCGTGAGGATGCTCTTTGGCTCT
ACATAGAGTCACGAAAACATTAGTTTGTGAACCCTTTGCACCAGCCGTATAACCCTCACTTTGCAAAACCTTTGCGGCAACAATATGAACGTCGGTAGTA
TGTAAACCTTTTGCAGCCACAATAGCAACTTCCCTTGCAAACCAGTATGCAATTTGAAAAATAATAGATGAGGATGCCTAATTGTATGGGCTCAAAGTCT
AAAATAAAAATTTTAAAATATTGTGACATAATATCACGTATCAGCTATTGATTNNNNNNNNNNNNNNNNNNNNGGTAGAGTTATGTTCTGAATTTGTCAT
TATAAAAAAAAATCGGGAACCAGAAGACTGACTTGATCAATAGCAAGAGCGATAAAAGAATGGAAGTCCTTCAATCAGAACTGATCGAAGATCCCAATGA
GAATTATAATTCATCTCTCTAGAAATTGTCGATGTGCATACAACTGCCTGTGAATTAATGCTTACAGTGCCAATAATAATTGCTTTCTCTCTCATCACCT
CGATTTTTATGCGATTCAAATATCATTTAGACGTGCTTCCAACACATCAACAAGGATGAGAGGTACGGCAAGTCCGCATCAATAACTTGGTCGACTTGAG
GGGAGCACAAAACGTTACCGTTCGCAAGAGAGCCATTTGCAACAGATTTGCATTGCGTGAGGATGCTCTTTGGCTCTACATAGAGTCACGAAAACATTAG
TTTGTGAACCCTTTGCACCAGCCGTATAACCCTCACTTTGCAAAACCTTTGCGGCAACAATATGAACGTCGGTAGTATGTAAACCTTTTGCAGCCACAAT
AGCAACTTCTCGTGCAAACCAGTTTGCAATTTATTTATGTGAAAAATAATAGATGAGGATGTCTAATTATATGGGCTCAAAGTCTAAAATAAAATTTTTA
AAATATTGTGACATAATATCATGTATCAGCTATTAATTTATATTTAATAATTAAAAATAAGTGTGATCTTCTTAAATATAAAATAAATAATCTTATATTG
TACAATCTTTTTTTTTATAATAAAACTTACATACCATCACTCCCATATCCCAATAATTGTTGGTTTATGCTCTATGACCTTGAGTGCTTTGCTTTAGCAA
CATTTTCCCCATTGATATAAAACTTTCCATGGTCATTAGGCACCTATGAGAATCTATCTCCACCATAACTCCTCTTGCATAAAACATTTTTTAATATTAA
CCTCCAAGCCCTTTGTATCCTCCCATTTGTAAAATTGAGAGATAATTAGGGATCTTTCCGGCCCCAAATTCCTCCAATTTTCTTCCCCAAAAATATCTCA
CAATTGCCAAAATTAGAACCATGTCTTATGAATCTTTGGTTATTGCCCTTTGTTAGTGAAAATGCAGCATGTATTCCTTTCCAAGCTCAAAGGCCCCTCC
CAACCAAAACAATTGTTCTAAAAATTCAAATGTATAATAATATATCAGATTTATATAGCGAACTCCAATTAATTGAAAAAAGATTTTGATGATGATGACT
TCCTATCAATTACACCCACATTTATTGGCGATGGCCAATTCCCATCCTAATTTAGTATAATTTTTTTTTTTTTTAACCCAAAAAATAAAGTATTTCTAAT
ATATTCCTTTATTATTATTATTATTCTTATTTTCTTATATTTTTAATATATGATTGGGACTGGACCTTGCCGAGTACCCCCAAGTTGTATGTACAATTAG
GGTTTACATGAAAAAATTTAAAAAAAAAAAAGTAAAAAACTCTCTCTCTCTATAACATTTGCAAAGTCGGCAGAGTAATTCCCACTCAACCAAGTTACCA
GGGCTCGGGCCCTTGCTGAGCCCGAGCTGGGTGTCCAACTCGGGGATATTAAAAAAAATTCAAATAAAATGTAAAAAATATTTAAAAATAATGAATTTAT
TTGAAATATGTTTTTTATACTTTTTATCATTTTGACGAAGATGGGAAAGTGTTTTAACCATAAATACTTATTTTTATTTTTAATCATTTTTTGATTATTT
GAAAATTACCTCAACTTCATTTTGATATGTTTTTGCTTAATCTTACTTTAAACATATATTTTTTATTTTTTATTTTTAATAATGTTTTGAACCATTTTTT
TGTTTCTACAATACTCGGCACTACTTGGACCGAGTTATTGGGACTCGGTCAGAGTACTGTGATCGGGCATGTGCTTGAGTACTCAACCCGAGCAGTTAGT
TTCCAACACTCCCTCTAACCCCTTTTCCAGTCCCCTCTCCCCCTCCCTCCCTCCCTCCCTGTCCTTTTTCCATCTCTCTAATTTCCAGTACAATACCCCA
AAGTTTAGCATCACCTCTAAGCAATTTCACAAACATTTTCAATCTCCACAGCCCTTGCTGCAAATCCATACCAATCTTCTCTCTCCTTGGTTGGGCTTCT
CAAACATAGAAGATGAAGACCCCACGAGGGATAGGTTATTAAGGTCCTTGCAGTAGCATCACCACACCTAATCACCACATTGTAGTTTCTCTTCTTATCA
CTAACACTATCTCACTAATACTTTTAAAAATATCACTCTTAATCTACTTTAAAAAAAAAAAACGGGTAAAACCTGTATTCCCCATTGAATAACCAAAAAA
AAAAAAAAATCCCAATATGGATGGCAATGGACCCATACACGACCCGAAACTCGAGGGGTACACCTGATCTCGATCTAAATATGGATCAAAATATTTGACC
CGACGGATTAAATCCATGTTCAAATCTTGGACCTAAACACTATTCAGATTTGAGTGTGAATTTGAGTCCAAAACCATCATTGCCGCCCCTAAACCCCATA
ACTGCTGAGGCATGGAGGGAAAGGAGATACGAAAAAGATTTGAGAGAAGTGGAGGGGTTACATGGCGGGGTTTGGAGAGAATTGAGGGCTGCGTAGCCCA
AGGCCGGGGCCATGGAGGGAAAGGAGATATGACAAAGATTTGAGAGAAGCGGAGGGGTTACATGGCCGGGTGTGGAGAGAGGGGAGGGCTGCGTGGCCCG
AGGCCGGGGCCATGAGAGATTGAATAGACCTCTCTTTCCTTACCGGAGGGAGAAGGATCTGTTTTGTCAATCTCTCTCCACCCCATTTGTGGGAAGAAAG
AGAGATCGGATCGACCTCTCTCTATGGGAAGAACGCTGTTCGTTTTGTGAAAGAATCATTTACCGAACCTACCAAATTTTCCAGTCCTCCAACCAGCTTT
CCCACCACTAACTATTCTACTAAAAATTGGCAAACCAGATCACAACGAGCCAATTCGTATTAGGAAGTCGTTAGGCCGTTTTGGGATTTGACAAAGCATT
TGAACAAACTAGCTCCCCTCTAAACTGGCTAGTTTTTTAAGAGAAGCAACTAATCCCACTGTAATTACTAATATTCTTTATTATTTTTTATTTTTTTTAA
GAAAAATTTATCGACAGATTCACTCCACACAAGACCAATCCAGCCAAATTTTCCAGCCAGGCCAGTGACGCATGACACCGTTCAAGGGCAATCATGCAAT
TTTTTCACAATGCGTGTGTAAAATGACCAATGCAAAAGGCCAGCAAAGGTGGGGACAAAGATGATAGCATAAACCCAAAAGCATCACGGGTGATGATCCC
TCACTGTCCGGGACCATTTTCTCTCTTTAACTTTGAAAAGCATCTCTCTCTCTCTCTCTCTCTCCTCCTTTATTCACATGGCATGCATAGATCAATATAT
AAAAATAAGGCTCTCCTCATGATAAAGCACCACCACCAAACGTTCACAATTATTGATGGATGAGAGAGAGAGTAGCTGACATTTACATAGATTCAGACCA
CACACACTAACCGGGAAGAGAGGCGAACAAAACAAAACCTACACGTCTCCCCTTTGCATTTACACAAAGCCTGCAACTCTTTAGAGATCAGTGGAGAGAG
AAAAGTCACCAAAATGAAAGGAAACCCAACAACTTCTGCAAATTTTGAGGCTATGTTTAAGATCTGGATTTAAAGGGAATGGCCCTGATCACAATTTGGT
GGTAAACAGCAGCAAGAGCAGCTCCAATGAAGGGACCCACCCAGAAAATCCACTGCAAAACATTTGTAATCATGGTTTTAGAGAGAGAAAATAGAAGGTA
GACCTTTACCAAAAAAAAAAGAAAGAAAGAAGATAGACTGGTTAGAGGAGAGACAGATGATGAAAGAGAGTGGATTAGATGGTCTGATTAGAGAGATAAA
GCCTTTGAGTCTTCGACAGATGATGAGAGAGTGGATTAGAGACAGAAAGTAAAGACTGGTGGACAAACAAAATAGAGCAGTCGAGAGAGATTAGAAAGAG
CAAAAGTAGAGAGAGAAAGAGAGTAAAGTCTGAAAGTGAAATCGAATAAAGAGTACTCAGACTATCAGAGTAAGAATTGAGCAAAGATTAGTAGAGAGAA
ATGAGGGGAGAGACCTGTAGAGAGAGAAAGAGGTAGAGTGAAAACAGAGTAGAGAGAGAAAATATAGTAGAGAGAGAAGAAACATACATGGTCGTCCCAG
GCTTGGTCTCGCCGTTTTGCACCCTGTTAGCTCCGCCTCCATGCACCTGGTATTGACTCTTTTCGAACCCTTTCACCACCCCAGCTCCGCAAATGGCACC
AAGGCATTGCATCACCATGTAAAACACAGCTCTAGTGAGAGAAAGCTTCCTCGCCAGAAGAAGCCCGAAGGTCACTGCAGGGTTGATGTGCCCACCTG