Detailed information on CNT30317557


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3042748Corylus avellanaPrunus dulcis14.5122.1592.1964forward
CNT3054194Corylus avellanaAmborella trichopoda20.631.684.6291forward
CNT30120255Corylus avellanaCitrus clementina19.2728.8187.0685forward

Expression of CNT30317557

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MALITTVWYRAASAAPMNGPTQKIHCTHSK*

>peptide 2 (34 aa)
MVPPRKSTAPTVNENKKVVRSRNIYRLGDAVMGC*

>peptide 3 (60 aa)
DLYSSIRTEALLLDRQYKLTEAYKAYPLEMGPINKPPFEQKGSREEGKKKQRDWTSSAWF*

Sequence

>CNT30317557
TCGATTTATATAGTTCGATCAGAACAGAAGCATTGTTATTGGATAGACAATACAAGCTGACAGAAGCATACAAAGCCTACCCACTAGAAATGGGGCCCAT
CAACAAACCTCCGTTTGAACAAAAAGGCAGTAGGGAAGAAGGAAAGAAAAAACAAAGAGACTGGACAAGCTCGGCTTGGTTTTGATTTTCATCTTGTGAT
CTTGAGCCAGCAACATCACGGGCTGTTTGATCAGATCAACCATCACTTCGATTTGAAGGGCATGGCCCTGATCACAACCGTGTGGTACAGAGCTGCAAGT
GCTGCCCCAATGAATGGTCCCACCCAGAAAATCCACTGCACCCACAGTAAATGAAAACAAAAAAGTTGTAAGAAGTAGGAACATATATAGATTAGGTGAT
GCCGTGATGGGTTGTTAAAATCATGAGATTAGAGAAATCAG