Detailed information on CNT30112805


BLAST search results

BLAST vs Swiss-Prot:
sp|P42027|NDUS7_BRAOL, E-value = 2e-52

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30617603Ficus caricaSesamum indicum49.4452.8185.93263forward
CNT30273993Ficus caricaChenopodium quinoa44.3646.0979.66236forward
CNT30166899Ficus caricaPistacia vera31.3934.2989.22167forward
CNT30653852Ficus caricaRosa chinensis48.8717.2890260forward
CNT30363204Ficus caricaSorghum bicolor25.7528.9686.86137forward
CNT30570482Ficus caricaVitis vinifera17.4839.5787.193forward

Expression of CNT30112805

Peptides detected in this lncRNA

>peptide 1 (82 aa)
MGQMEPRRAQFIRSSTFEITNSAVLDSPAGDEVEGGGGERRNGGVEGEGALGRELEGNPRRGSGHESHGACRQRKTDADGRR*

>peptide 2 (79 aa)
MKILRERESGNSVLAKSRGHLVGESAGDDHAVGLAGAGPEDDPESVEVVAGGAGVHHLDGAAGEPEGHGPDGATAGPVH*

>peptide 3 (30 aa)
MRAMAPAANGRQMLMGGVELWNRMEERKGEI

Sequence

>CNT30112805
AATTGCAGGGGATAATCAGTTATCAAAACCAAAAAGCCCCAAATGAAAATCCTAAGAGAAAGAGAGAGTGGGAATAGCGTACTTGCGAAGAGCAGGGGCC
ATCTTGTTGGTGAGAGTGCCGGCGACGATCATGCAGTCGGACTGGCGGGGGCTGGGCCTGAAGATGATCCCGAATCGGTCGAGGTCGTAGCGGGCGGCGC
CGGTGTGCATCATCTCGACGGCGCAGCAGGCGAGCCCGAAGGTCATGGGCCAGATGGAGCCACGGCGGGCCCAGTTCATTAGATCGTCGACCTTCGAGAT
CACGAACTCCGCCGTCTTGGACAGCCCCGCCGGCGACGAGGTCGAGGGCGGCGGAGGAGAGAGAAGGAACGGTGGTGTGGAGGGAGAGGGTGCGCTGGGC
CGCGAGCTGGAGGGGAATCCGCGACGAGGTTCGGGTCATGAGAGCCATGGCGCCTGCCGCCAACGGAAGACAGATGCTGATGGGAGGCGTTGAACTATGG
AATAGAATGGAAGAGCGAAAGGGGGAGATTTG