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Detailed information on CNT30617603


BLAST search results

BLAST vs Swiss-Prot:
sp|Q43844|NDUS7_SOLTU, E-value = 1e-52

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30112805Sesamum indicumFicus carica52.8149.4485.93263forward

Expression of CNT30617603

Peptides detected in this lncRNA

>peptide 1 (40 aa)
MGQMEPRRAQFIRSSTFEITYSAALDIPAGDEVEGGGAEE*

>peptide 2 (35 aa)
LRRAGAILLVRVPATIMQSDCLGLGLKMIPNRSKS*

>peptide 3 (65 aa)
AESRSHLIGESSSNNHAIRLPGAGSENDSKPIQIVARGPGVHHLDSAAGQPKGHGPDGASASPVH*

Sequence

>CNT30617603
TTGCGGAGAGCAGGAGCCATCTTATTGGTGAGAGTTCCAGCAACAATCATGCAATCCGACTGCCTGGGGCTGGGTCTGAAAATGATTCCAAACCGATCCA
AATCGTAGCGCGCGGCCCCGGTGTGCATCATCTCGACAGCGCAGCAGGCCAGCCCAAAGGTCATGGGCCAGATGGAGCCTCGGCGAGCCCAGTTCATTAG
GTCATCGACCTTCGAGATCACATACTCCGCCGCCTTAGATATCCCGGCGGGCGACGAGGTCGAAGGAGGAGGGGCAGAAGAGTAGGGCGTCGGGGCGGAG
GAAGAGGAAGCGGCGAGAGAAGGGAGGGTGGTGTGAATAGAGGCGAGGGCGGAGCGGTGGTGATACGGCGTCGTCTGGGAGAGTACGCGTCCGGCGTTTC
TGGCTAGCTGAGCCATTTTCCCTCTGTTCTATTTTTCTGGATCGCAAGAAGGCGGTGTTTATGCTGAAATGGGCGAGATGGGGAGAAATGGGGCGAGG