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Detailed information on CNT30102268


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30554200Oryza rufipogonOryza glaberrima57.6647.1699.68316forward
CNT30596455Oryza rufipogonOryza meridionalis30.1135.7998.79165forward
CNT30370422Oryza rufipogonOryza glumipatula55.1146.0499.01302forward
CNT30576740Oryza rufipogonOryza barthii58.2147.1999.69319forward
CNT30116911Oryza rufipogonOryza nivara20.6232.4799.12113forward

Expression of CNT30102268

Peptides detected in this lncRNA

>peptide 1 (44 aa)
LLVVLGLGFELAVILQGLVMELVLDLLVVVVVGGREVLLPGVGV*

Sequence

>CNT30102268
CTTCTTGTCGTCCTTGGCCTTGGTTTTGAGCTTGCTGTGATCCTGCAGGGCCTTGTGATGGAGTTGGTCCTCGATCTCCTCGTCGTCGTCGTCGTCGGTG
GCAGAGAAGTCCTCCTCCCAGGTGTAGGAGTGTGACCATGGCTCGAGGCAACCCTTGCCCTTGAGGTGGGTGGCCCACTTGAGCTTGGTGGCAGCAGCGG
AGGCGGTCTTGGCCTTGGCCTCCCACTTCCACTTGCGGTCGAATCCATCGTCGTAGGGGGAGTCGAGCTCAGCCTCCCACTTGAGCACCCTCTCGCCGGC
GCGAGGCTTGTCCTCGGTGGTGCACTTCCTGCTGGTGGGCCTGGGGTGTGGGGCGCGGGCGGCGAGGGCGAGCTCGAGTTGGGAGACGCGGTCGGTGAGG
GTGTGGAGGAGGAAGGGGTCGAGGAGGGAGCTAGTGGGCGTAGCGGTGGTGAGAACTCATGGTGGCCGGCGGCGGTGGAGCTCTCTGCTCAGCTGCCGCT
GGAGTGGGAGTGTGAAGGAGACTTGGTGATCTGCTGATCTGATCTGAT