SEARCH OPTIONS

lncRNA id
CNCI status
Max. peptide length
Is conserved?
Organ-specific expression:
Max. expression
No. of exons
Order results by

Current search details:

Found 6775 records

CNCI status:   #
Max. peptide length:   #
Is conserved:   #
Organ specific:   #
Max. expression:   #
No. of exons:   #
Order by:   lncRNA ID


Record details CANTATAdb ID Species Location CNCI status (score) Swiss-Prot best hit Max. peptide length Max. expression No. of exons Notes
CNT30372506 Arabidopsis thaliana 1:986292-988141 (-) noncoding (-0.0241664)2e-93 (sp|P15456|CRU2_ARATH) 75 3.04 3Conserved counterparts:
CNT30372505 Arabidopsis thaliana 1:6449229-6449459 (-) noncoding (-0.0004096)- 76 0 1
CNT30372503 Arabidopsis thaliana 1:6500050-6500381 (+) noncoding (-0.0004096)- - 3.01 1
CNT30372502 Arabidopsis thaliana 1:2395452-2398027 (+) noncoding (-0.0159744)6e-89 (sp|Q8VY27|E70H1_ARATH) 62 3.25 4Conserved counterparts:
CNT30372501 Arabidopsis thaliana 1:1024864-1026326 (-) noncoding (-0.012288)2e-38 (sp|Q9ZWB9|FAO1_ARATH) 33 3.66 3
CNT30372500 Arabidopsis thaliana 1:25057479-25058264 (+) noncoding (-0.178995)- 34 144.34 1
CNT30372499 Arabidopsis thaliana 1:12118994-12123896 (+) coding (0.085)0 (sp|Q9C810|Y1342_ARATH) 92 1.89 6
CNT30372498 Arabidopsis thaliana 1:26186391-26186596 (-) noncoding (-0.0004096)- 33 0 1
CNT30372497 Arabidopsis thaliana 1:5187792-5188919 (-) noncoding (-0.004096)- 43 0.27 2
CNT30372496 Arabidopsis thaliana 1:5629194-5631131 (+) noncoding (-0.032768)8e-87 (sp|Q9SA47|MYB58_ARATH) 83 1.67 2
CNT30372495 Arabidopsis thaliana 1:23973612-23978335 (-) noncoding (-0.06144)- 83 8.51 6Conserved counterparts:
CNT30372494 Arabidopsis thaliana 1:3889112-3889839 (-) noncoding (-0.028672)- 51 8.41 2
CNT30372493 Arabidopsis thaliana 1:25048328-25049268 (+) noncoding (-0.090112)- - 43.53 2Conserved counterparts:
CNT30372492 Arabidopsis thaliana 1:12972058-12972304 (+) noncoding (-0.0004096)- 53 0.76 1
CNT30372491 Arabidopsis thaliana 1:3361410-3362012 (-) noncoding (-0.053248)- 85 0.25 1
CNT30372490 Arabidopsis thaliana 1:25054071-25054794 (-) noncoding (-0.02048)- 48 3.19 2
CNT30372489 Arabidopsis thaliana 1:20179577-20180265 (+) noncoding (-0.032768)0.000000000004 (sp|P46516|HSP21_HELAN) 55 9.54 2
CNT30372488 Arabidopsis thaliana 1:6184946-6186170 (-) noncoding (-0.014336)- 56 4.64 2
CNT30372487 Arabidopsis thaliana 1:7387975-7400638 (+) noncoding (-0.090112)1e-71 (sp|Q9LPU5|IGMT1_ARATH) - 0.41 2
CNT30372486 Arabidopsis thaliana 1:20440202-20440727 (-) noncoding (-0.012288)- 35 4.57 1
CNT30372485 Arabidopsis thaliana 1:9175642-9177598 (+) noncoding (-0.229786)- 59 2.18 3Conserved counterparts:
CNT30372484 Arabidopsis thaliana 1:25848544-25848803 (+) noncoding (-0.0004096)- 30 0 1
CNT30372483 Arabidopsis thaliana 1:1766619-1767251 (+) noncoding (-0.02048)- - 1.49 2
CNT30372482 Arabidopsis thaliana 1:3305948-3306688 (+) noncoding (-0.0004096)- 54 0.67 1
CNT30372481 Arabidopsis thaliana 1:7223476-7223713 (-) noncoding (-0.0004096)- - 0.24 1
CNT30372480 Arabidopsis thaliana 1:12956259-12957069 (+) noncoding (-0.0004096)- 45 0.37 2
CNT30372479 Arabidopsis thaliana 1:9572455-9572689 (-) noncoding (-0.626688)- - 9.64 1
CNT30372478 Arabidopsis thaliana 1:16817810-16818214 (-) noncoding (-0.0479232)- 58 1.55 1
CNT30372477 Arabidopsis thaliana 1:2562898-2563673 (+) noncoding (-0.0233472)5e-118 (sp|Q9SGE3|H2B2_ARATH) 72 28.5 2
CNT30372476 Arabidopsis thaliana 1:5479274-5481730 (-) noncoding (-0.04096)- 53 10.62 1
CNT30372474 Arabidopsis thaliana 1:2691237-2691804 (+) noncoding (-0.04096)0.000000000000004 (sp|G3ESV1|FATB3_CUPVI) 96 0.95 2
CNT30372473 Arabidopsis thaliana 1:18867704-18868089 (+) noncoding (-0.053248)- 57 2.52 1
CNT30372472 Arabidopsis thaliana 1:5356374-5356587 (+) noncoding (-0.0004096)- - 6.92 1
CNT30372471 Arabidopsis thaliana 1:28934584-28937177 (-) noncoding (-0.01024)- 41 13.85 4Conserved counterparts:
CNT30372470 Arabidopsis thaliana 1:27416042-27419044 (+) coding (0.02)2e-19 (sp|P0DKH6|RPS6R_ARATH) 84 1.74 4
CNT30372469 Arabidopsis thaliana 1:12119015-12123896 (+) coding (0.085)0.0000000000009 (sp|P93310|M550_ARATH) 92 1.75 8
CNT30372468 Arabidopsis thaliana 1:25417378-25420252 (+) noncoding (-0.02048)0 (sp|Q9FXE2|SEOC_ARATH) 63 2.39 2Conserved counterparts:
CNT30372467 Arabidopsis thaliana 1:20798579-20798938 (+) noncoding (-0.0004096)- 71 0.11 1
CNT30372465 Arabidopsis thaliana 1:8319663-8320431 (-) noncoding (-0.0004096)- 58 0.24 2
CNT30372464 Arabidopsis thaliana 1:19854720-19855056 (+) noncoding (-0.0004096)- 65 1.85 2
CNT30372463 Arabidopsis thaliana 1:8388525-8391580 (-) noncoding (-0.012288)- 85 0.83 5Conserved counterparts:
CNT30372462 Arabidopsis thaliana 1:43087-43295 (-) noncoding (-0.0004096)- 39 0 1
CNT30372461 Arabidopsis thaliana 1:28255108-28257236 (-) noncoding (-0.045056)3e-84 (sp|P52577|IFRH_ARATH) 97 13.45 4Conserved counterparts:
CNT30372460 Arabidopsis thaliana 1:20614759-20616180 (-) noncoding (-0.0004096)5e-106 (sp|F4I082|LTPG6_ARATH) 48 1.83 3
CNT30372459 Arabidopsis thaliana 1:2293014-2293251 (-) noncoding (-0.0004096)- 77 6.94 1
CNT30372458 Arabidopsis thaliana 1:26161599-26162761 (+) noncoding (-0.024576)0 (sp|Q9SEZ3|CDF5_ARATH) 67 7.9 2Conserved counterparts:
CNT30372457 Arabidopsis thaliana 1:23262295-23263024 (+) noncoding (-0.0065536)- 39 1.89 2
CNT30372455 Arabidopsis thaliana 1:10274016-10275727 (-) noncoding (-0.012288)- 70 6.59 3
CNT30372454 Arabidopsis thaliana 1:24051980-24052457 (-) noncoding (-0.032768)3e-56 (sp|P11139|TBA1_ARATH) - 19 1
CNT30372452 Arabidopsis thaliana 1:2184318-2187941 (+) noncoding (-0.036864)5e-98 (sp|Q9LMK4|IPGL1_ARATH) 72 3.65 5