CANTATAdb - search

Detailed information on CNT30611685

BLAST search results

BLAST vs Swiss-Prot:
sp|Q9FXE2|SEOC_ARATH, E-value = 9e-44

BLAST vs NONCODE: nothing found

Expression of CNT30611685

Peptides detected in this lncRNA

>peptide 1 (46 aa)
MKRSGSIGRSSGFDNSSSITFSFSSVVAICHWMIKNIESNELCSSEG

>peptide 2 (49 aa)
MLSNRSQNKMELSSMADSEAIVCLLRKNALKQELHRPTIFFPKLIFSSN*

>peptide 3 (53 aa)
MAFMFTTFPLESITTTIASPSRYGHSVFKKFSTVELINHGRFTEIHDGWSYNC*

>peptide 4 (56 aa)
KRNHHRVTLFTRLLRRDSNRLRKTKSRRILSPPQNTPHPLRHLLPVYPDNFSRLRR*

Sequence

>CNT30611685
TCAAACGGAACCACCACCGTGTGACTCTCTTCACACGGCTTCTCCGCCGCGATTCGAATCGCCTCCGTAAAACCAAGTCCCGTCGCATACTCTCCCCACC
TCAGAATACGCCTCATCCTCTCCGTCATCTTCTCCCCGTCTACCCGGACAATTTCTCCCGTCTCCGTCGCTGATCCCTTTCCGATAATTGCCCAACCCTT
GTGTGTACCGTAATCGAAATCAAGGAGTTTAGTAACTTGTTCAAACACACGATCGGATTCACTTCGCTTGAGCTTCGATCGTTTGATGCTCTCTAATCGT
AGCCAGAACAAGATGGAGCTCTCTTCCATGGCTGATTCAGAGGCTATTGTGTGTTTACTGAGGAAGAATGCCTTGAAGCAAGAGTTGCATAGACCAACCA
TCTTCTTCCCAAAGCTCATCTTCTCTAGCAACTGAAAATGGATATGCTCTAACACCCCATATCAACACCATATCCATGGCATTCATGTTCACAACATTCC
CATTAGAATCCATCACCACCACCATTGCCTCGCCGTCTCGGTACGGCCATTCTGTTTTTAAGAAATTCAGTACTGTGGAGCTCATCAACCATGGCCGCTT
TACTGAGATCCATGATGGATGGTCGTATAATTGTTGAAGCATGAAGAGAAGTGGCTCTATAGGTAGGAGTTCTGGTTTTGATAATAGCAGTAGTATTACC
TTTTCCTTTAGCTCAGTTGTAGCTATCTGTCATTGGATGATAAAGAATATTGAATCAAATGAATTATGCTCTTCTGAAGGT