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Detailed information on CNT30509954


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONSLYT001832, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3094185Solanum lycopersicumSolanum tuberosum103.325.8885.47344reverse complement

Expression of CNT30509954

Peptides detected in this lncRNA

>peptide 1 (33 aa)
PLGDGPLHSGISSLELILRRRKDSRGIINKADS*

>peptide 2 (44 aa)
LLEMDLFTVVSVLWSSFCVEEKIQEELSTRLILNEDCRVEATSS*

Sequence

>CNT30509954
ACCTCTTGGAGATGGACCTCTTCACAGTGGTATCAGTTCTTTGGAGCTCATTCTGCGTAGAAGAAAAGATTCAAGAGGAATTATCAACAAGGCTGATTCT
TAACGAAGATTGTCGGGTTGAGGCTACAAGCTCCTAGATCTGTTGTTGGAACCCTTTTTGAGTTGAAGAAGTCTTCCAGGAGATCGATTCCATAACACTC
GTGAGATATTAAGCGTATATATGGAATTCACTCAAGCTCAACAATAATTCAAAGAATTTGGGGCCATTTTGGAGGAACATAGATAAATAAGCATTCTAAA
TGGAGAAATGCTCTTGGACAACGGCGTTTGATA