Detailed information on CNT308584


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30696681Zea maysOryza sativa29.3521.0791.5359reverse complement
CNT30303253Zea maysTriticum aestivum21.897.3995.4544forward
CNT30552671Zea maysOryza glaberrima27.861098.2156forward
CNT30461159Zea maysSaccharum spontaneum30.358.5393.4461reverse complement
CNT30345743Zea maysEragrostis tef28.364.0798.2557forward
CNT30364751Zea maysSorghum bicolor25.873.6196.1552forward
CNT30105774Zea maysOryza longistaminata27.863.2698.2156forward
CNT30575110Zea maysOryza barthii27.866.1698.2156forward

Expression of CNT308584

Peptides detected in this lncRNA

>peptide 1 (65 aa)
ARIQKRKKVLWISVPPRRGVMRRTREIREQTCVAASRMIFFARIAQASPWRWMGCGFGVLVVGVRR

Sequence

>CNT308584
CGGCAAGGATCCAGAAGAGAAAAAAGGTTCTCTGGATCTCTGTTCCTCCTAGGAGAGGTGTTATGAGAAGAACCAGAGAGATCAGAGAACAAACCTGCGT
CGCTGCGTCGCGGATGATTTTTTTTGCTCGGATCGCTCAAGCCTCACCGTGGAGATGGATGGGATGTGGCTTTGGTGTTCTTGTGGTGGGGGTGAGGCGT
G