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Detailed information on CNT3084527


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30677458Vigna radiataSetaria viridis11.013884.05163forward
CNT30628432Vigna radiataVigna unguiculata34.3962.7693.71509forward
CNT30712600Vigna radiataGlycine max17.334.3288.67256forward
CNT30442767Vigna radiataAegilops tauschii10.1429.5980.67150forward

Expression of CNT3084527

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MVHSANNDTSMVDQVRKRETERGCTNDDNLT*

>peptide 2 (34 aa)
MLAPTETATKRPNAWAMEAERSPAGELVVGDAGA*

>peptide 3 (44 aa)
SITTCSHLFHFIPITPYRFNNKIISLQSSRILYHFCFIYPYQVT*

>peptide 4 (68 aa)
MINSFSFFFLVQSSSLDTLFTVAMIDRLRVNKFELCHKLEKRGKHFNSTEAAVKWYIQPIMIHPWWTR*

Sequence

>CNT3084527
TTTCGATCACAACTTGCTCACATTTATTTCATTTTATCCCTATTACACCATACCGCTTCAATAACAAAATAATATCTTTACAATCTTCTCGTATTCTCTA
CCATTTTTGCTTTATATATCCTTATCAGGTCACATAGTAGCTCATATATATTTTTTAGGAAAAAGATGTAAAGCTATGTGTTTCAAGGAGAATAACTGAC
CAAGTAGTCACGGTACAAGATAAAATATACACGATAACTTCACATATTGGAGGCCTCTGAAAGGGTGCATTATTCCTAAACAAGGAGACAAACTAGATTT
CTGGAAAAGTTATTGATGAGCATATATAACACTGACGATAGATGCCTAGCTATATGATCCTGTTGAATCTGGTTTAGTTTCTTTCTCTAATCAACGTTCT
ACAATCATTCTTCCTGGCTTTTAATAGTGTTATACTGTGGTCGGTACTCGTACGTCTTCTTTAGGGAAGTGAATTACCCATCCACGCTGGTGGACCCACT
CTTTGCATGTGCTTCAACGATTCTCCTTTTAAGAACTTTTGTCGCATACCATGATTAACTCTTTTTCATTTTTTTTTTTAGTTCAATCTTCTTCTCTGGA
TACTTTGTTCACTGTCGCAATGATTGACAGATTAAGGGTTAATAAATTCGAACTGTGCCACAAATTAGAAAAAAGAGGAAAGCATTTCAATTCGACAGAA
GCAGCAGTGAAATGGTACATTCAGCCAATAATGATACATCCATGGTGGACCAGGTGAGAAAGAGAGAGACAGAGAGAGGATGCACAAATGATGATAATTT
AACTTAAAAGAGAACATGATCATCAACCATCCAACCAAAGATCAACGTCCACCGATTCAACACGAAAGGAACAACCCGCGAAAGTAGAATGAAGAGAAAC
ACAAGGAAAAAAAAACATACACAGAAGAAAATCGAAGGTGAAATTCAATAATAGACAATTTTTTTTTTTTGTTTATTTTTCTGATTTCGGGTCTAGTAGT
CAGTGGTTGGGAGCTGCTCGTGGGTGTGGCTGATGAAGACGACCTCGTAGATGACTCCGGCGATGCCACCACCGATGAGAGGGCCGACCCAGTAGATCCA
GTTGTTTTCCCAGGTCCAGCTAACAACGGCAGGTCCGAATGTGACGGCGGGGTTCACGTGACCTCCGGAGATGTTGGCGCCGACGGAGACGGCGACAAAA
AGGCCGAATGCGTGGGCGATGGAGGCGGAGAGGAGTCCGGCAGGTGAGCTTGTTGTAGGCGATGCCGGAGCCTGAGCCGGCGAACACGAAGATGAAGGTG
GAGATGAACTCGGCCAAAGCCGCCTTCAACGTGTCGGGGTGAGTGGCCTCCTCGGGCCTTCCGATGGCGATGTTTCTGATCGGCATCTTCAATCGACGGT
GGTGATGATTACGACTGGTGAAAGATGAAGTGAACACCGAGATCACTCACTCAAATCACTCTCTGTTTCGCTGCCACTGA