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Detailed information on CNT30628432


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9FY14|TIP1_MEDTR, E-value = 9e-52

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30677458Vigna unguiculataSetaria viridis20.13883.44163forward
CNT30586176Vigna unguiculataMusa acuminata19.9826.5682.72162forward
CNT3084527Vigna unguiculataVigna radiata89.448.9992.14725forward
CNT3057351Vigna unguiculataAmborella trichopoda20.2219.2781.1164forward

Expression of CNT30628432

Peptides detected in this lncRNA

>peptide 1 (35 aa)
TEASVKWYIQPEPNNDTLSNGGPGEKERDGERMHK*

>peptide 2 (35 aa)
MLAPTETATKRPNAWAMEAEMSPAGVAAPLSVSLL*

Sequence

>CNT30628432
TGACAGAAGCATCAGTGAAATGGTACATTCAGCCAGAACCCAATAATGATACATTATCCAATGGTGGACCAGGTGAGAAAGAGAGAGACGGAGAGAGGAT
GCACAAATGATGATAATTTAACTTAAAAGGAGAACATGATCATCAACCATCCAACCAAAGATCAACCAACGGCCACCGATTCAACACGAAAGGAACAACC
CGCGAAAGTAGAATGAAGAAAAACACAAGGGAAAAAACATACACAGATCGAAGAGAAATTCAGTAATTGACAATTTTTTTTTTGCTTATTTTTGTGATTT
CTGGGTCTAGTAGTCAGTGGTTGGGAGCTGCTCGTGGGTGTGGCTGATGAAGACAACCTCGTAGATGACCCCAGCGAGCCCACCACCGATGAGAGGGCCG
ACCCAGTAGATCCAGTTGTTGTCCCAGGTCCAGCTAACGACGGCAGGTCCGAATGTGACGGCGGGGTTCACGTGACCTCCGGAGATGTTGGCGCCGACGG
AGACGGCGACAAAAAGGCCGAATGCGTGGGCGATGGAGGCGGAGATGAGTCCGGCAGGTGTGGCGGCGCCGTTGTCAGTGAGCTTGTTGTAGGCGATGCC
GGAGCCTGAGCCGGCGAACACGAAGATGAGGGTGGAGATGAACTCAGCCAAAGCCGCCTTCAACGTGTCGGGGTGAGTGGCCTCCTCGGGCCTTCCGACG
GCGATGTTTCTGATCGGCATCTTCAATCGACGGTGGTGATGATTACGACTGGTGAAAGATGAAGTGAACACCGAGATCACTCACTCAGATCACTCTCTGT
TTCGCTGCCAC