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Detailed information on CNT30631202


BLAST search results

BLAST vs Swiss-Prot:
sp|P27522|CB13_SOLLC, E-value = 8e-75

BLAST vs NONCODE:
NONBRAT004778, E-value = 4e-19

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3073350Vigna unguiculataBrassica juncea79.6669.2279.47380forward
CNT30259100Vigna unguiculataBrassica rapa79.6651.1479.74380forward
CNT30649241Vigna unguiculataRosa chinensis22.439.484.11107forward
CNT30718929Vigna unguiculataMalus domestica golden25.1612.9382.5120forward

Expression of CNT30631202

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MAVLSPQGSDQPCPEFQVLWHQLRPTLQNDH*

>peptide 2 (40 aa)
MAPTAPNIAKRPLMISPYASHFGSMNPPVPSGSESPRGSNP

Sequence

>CNT30631202
AAAGTGATTGAGTTTTGGTAACTGCGTACAACAACAACACCAACAACCGAGACAGTAAAGAATATGTAACAACATATGATACATCAGTGGAACTTGAGAC
TGGTCAAGATGTTGTTGTGCACAGGGTCAGCAAGATGATCTAGGAGTACTGCTTCCCCATAGACCCTGGTTTCGCCCAGTCTTGGAATCTTCTGTGTTCT
GCAAAACCCATCAGTGCCATCTCCAACACGAACAGCGTGTACGAGTCTGCCCAGTAGTTGTATGTTCCTGCGGGTGGGAACACACCGGTTCTGAACCATG
GCAGTGCTGTCTCCTCAGGGATCAGACCAGCCTTGCCCAGAATTTCAGGTGCTATGGCACCAACTGCGCCCAACATTGCAAAACGACCATTGATGATCTC
ACCATACGCTAGCCATTTCGGCTCGATGAACCCCCCTGTTCCTTCAGGGTCTGAAAGCCCAAGAGGGTCAAATCCAT