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Detailed information on CNT30714783


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30727469Malus domestica goldenCorchorus capsularis51.3251.3283.97156forward
CNT30538642Malus domestica goldenBrassica napus20.3926.3893.5562forward
CNT30261746Malus domestica goldenBrassica rapa20.3926.3893.5562forward
CNT30210362Malus domestica goldenHelianthus annuus49.0148.5385.91149forward
CNT30644641Malus domestica goldenCannabis sativa48.6839.7884.46148forward

Expression of CNT30714783

Peptides detected in this lncRNA

>peptide 1 (33 aa)
MREAGFTEQRKRPALNSGRITCRCTASPDCLMG*

>peptide 2 (55 aa)
PSYVTLACNPSGGAKVVGHRFDPFGRTSRCNLLARPFQVESWALWFGLKLGPRGP*

Sequence

>CNT30714783
GCCGAGCTATGTCACTCTAGCTTGTAACCCAAGTGGGGGCGCCAAGGTGGTGGGACATCGGTTCGACCCATTTGGTAGGACTAGTCGTTGCAATTTGCTG
GCTCGCCCGTTCCAAGTTGAGAGTTGGGCCCTGTGGTTCGGGCTTAAGCTTGGGCCACGTGGCCCTTAGAGCGGAGGGCAATGCGTGAGGCTGGTTTCAC
AGAGCAGCGTAAACGTCCCGCTCTCAACAGTGGAAGGATAACGTGTCGGTGCACCGCTAGCCCAGATTGTCTAATGGGTTGAAACCAGTTGAACCACCAC
CTTT