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Detailed information on CNT30714323


BLAST search results

BLAST vs Swiss-Prot:
sp|P22895|P34_SOYBN, E-value = 4e-21

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30513754Malus domestica goldenJuglans regia47.1344.9382.93164forward
CNT30269299Malus domestica goldenChenopodium quinoa52.333.2779.12182forward
CNT3046701Malus domestica goldenPrunus dulcis58.0542.3592.08202forward
CNT30163304Malus domestica goldenPistacia vera58.335881.28203forward
CNT30651914Malus domestica goldenRosa chinensis62.0745.8687.5216forward
CNT30571877Malus domestica goldenVitis vinifera58.6251.6581.86204forward

Expression of CNT30714323

Peptides detected in this lncRNA

>peptide 1 (47 aa)
SMFDQMDSRRSPHNHLVTEMVVVVVVMVVEVVVAVVTAAQEVQMTLW*

Sequence

>CNT30714323
AGCATGTTTGATCAGATGGACAGTAGGAGAAGTCCCCACAATCACTTGGTGACGGAGATGGTGGTGGTGGTGGTGGTGATGGTGGTGGAGGTGGTGGTGG
CGGTGGTGACGGCGGCGCAGGAGGTGCAGATGACTCTTTGGTAGGATATGAAGCCATGGCGTTGATTGCACAAACCCCATATGTTAAACTAGTGTTCCTT
CTAATGTAAATGTATCCATCCATCCCCCAACTAGTCCCCCATGAATTCTTTACAATCCAGTAATCTTCATCACCTTCAGAACCATATCCCACTATAAGAA
CCGCATGGTCAATGTCGTCTGGATCAGAGGAGCAGTCACCGTCATAGA