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Detailed information on CNT30713631


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30692294Malus domestica goldenOryza sativa15.920.893.9883forward
CNT3043428Malus domestica goldenPrunus dulcis18.3921.4395.8396forward
CNT30395161Malus domestica goldenTriticum turgidum15.923.3193.9883forward
CNT30652446Malus domestica goldenRosa chinensis17.2429.1394.4490forward
CNT30207452Malus domestica goldenHelianthus annuus11.6921.8696.7261forward
CNT30154619Malus domestica goldenPrunus persica18.3923.6595.8396forward

Expression of CNT30713631

Peptides detected in this lncRNA

>peptide 1 (46 aa)
IARVLLINASTSLPHSHNASPISHPPVLIGGPPTNIARFSSLASPP*

Sequence

>CNT30713631
TATAGCTAGGGTTTTGCTCATAAACGCTAGCACCTCGCTCCCTCACTCCCACAACGCATCTCCCATTTCTCATCCGCCGGTTCTCATCGGAGGACCTCCA
ACAAATATCGCAAGGTTTTCCAGTCTCGCTTCGCCGCCATGAGAGCCAAGTGGAAGAAGAAGAGGATGAGGAGGTTGAAGAGGAAGCGCCGAAAGATGAG
GCAGAGATCCAAGTGAGAGCAGCAGCTGAGTGTAGCTGTTCACATAGGGGTTCTCGTGTCCTTTTGGATTTTATCAGACTTAGCGGTTTGTTTAGAATTA
ATGTGAAACCTTTGGCGTTCTTATCTGTTTATCTTTGCTGCATTTCTTAATATTTAAATGGAATTTGACTGCTTTTTATGATTGCTTTGGTTTGATTAAA
GTGTGGTTTTACTTGTTGTTTGAGTTGTTTATGTTTTGCATTGTGGATTATCTGAGTAGAATGTTAAATTTTGGGGTTGATTTCAAATTGTTTAGTTAAA
TTTAGGAACCATGAAAACCCAT