Detailed information on CNT30705241


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30521812Prunus aviumSetaria italica1322.4680.14146forward
CNT30380261Prunus aviumManihot esculenta19.6822.678.73221forward
CNT30632133Prunus aviumVigna unguiculata19.0631.0182.71214forward
CNT3043231Prunus aviumPrunus dulcis18.3424.1584.95206forward
CNT30168852Prunus aviumPistacia vera6.6821.4385.3375forward
CNT30559342Prunus aviumActinidia chinensis14.7822.3183.13166forward
CNT30120990Prunus aviumCitrus clementina15.6726.0479.55176forward

Expression of CNT30705241

Peptides detected in this lncRNA

>peptide 1 (35 aa)
MRIAPTKKMAPERTTVYRRPIQSEVLPAKPEPMRE*

>peptide 2 (46 aa)
MQAKMEQAMAKLFLLGFCGGSKSAISVFLGWPEMALSSAVRSAISI*

>peptide 3 (46 aa)
MKRFAPLITPISVNKSDHTQFIHSKTNNSFLAELRLKKVRENDFEC*

>peptide 4 (63 aa)
MSCKPKWSRQWRSCFSWVSVADQSLQLVCSWVGRRWPCLQLSGQPSRSREREREREKERSIRE*

>peptide 5 (47 aa)
MPGVGLLLENFPGTGMPGSAVHVSIPGQLTLIFVGGDVERYEFSFFH*

Sequence

>CNT30705241
AAAAAAAAAAAAAAAAACAAAGGTAAATAAACAAATAAGGAAAGAAAACAAACCTCAGGGAAAGATGTGAGGAAGCCACGGGACAAAGTCGGAGAGATCT
CGGCGGTGTAGACCGGAGAGATCATGAGACCGTAGCCAACACCGATTCCAGCGACGAACCGGCCGAACATAAGGAAGGCGTAGTTCGGGGCGACGCCCAT
GAGGATAGCTCCGACGAAGAAGATGGCTCCGGAGAGGACGACGGTGTACCGGCGCCCGATCCAATCGGAGGTTCTGCCGGCCAAGCCCGAGCCGATGAGA
GAGTAGATGTTCAATGTGCCGGTAAGTATTTGAATCTTGACGTCGTCGATTTTGAGGTCCTCTTGGATGAAGAGGTTCGCCCCACTCATCACACCAATAT
CTGTAAACAAAAGTGACCACACTCAGTTCATACACTCCAAAACCAACAATTCTTTTCTTGCAGAATTAAGATTAAAAAAAGTAAGAGAAAACGATTTCGA
GTGCTAATAGGATAATTACCATAGCCCAGTAAAATTGATGTCATGCAAGCCAAAATGGAGCAGGCAATGGCGAAGTTGTTTCTCTTGGGTTTCTGTGGCG
GATCAAAGTCTGCAATTAGTGTGTTCTTGGGTTGGCCGGAGATGGCCTTGTCTTCAGCTGTCCGGTCAGCCATCTCGATCTAGAGAGAGAGAGAGAGAGA
GAGAGAAAGAGAGAAGTATCAGAGAGTGAGCAGCGACAGGGAGAGAGAGATGTAGAGTGAGGAATAGTAGAGAATATAATTCATTCAATATATAAGCAAA
CTCTTTCTTCAAGTAGTATTAATTATTGTAAAGGGATTTATCCGTATGCCGGGGGTTGGTCTTCTTTTGGAGAACTTTCCTGGCACGGGGATGCCAGGGT
CAGCCGTCCACGTCAGTATCCCCGGCCAATTAACTCTAATATTCGTTGGGGGCGACGTTGAACGCTATGAATTTTCCTTCTTCCACTAGTTGAAGGGGGA
TGGGTTCCAACACGATATTACGCGCTTATTAGAATCCTATGCTCGTCGGGTCTGGGTTAGTTGGCGATAAGCAAGGGAAGGGTGGAGTTGGGTTGTGTCA
GAGAGAGAGAGAGAGAGAAGGGC