Detailed information on CNT30168852


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9XIH6|PLT2_ARATH, E-value = 3e-62

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30380261Pistacia veraManihot esculenta51.4318.480.56180forward
CNT3043231Pistacia veraPrunus dulcis47.7119.5881.44167forward
CNT30705241Pistacia veraPrunus avium21.436.6885.3375forward

Expression of CNT30168852

Peptides detected in this lncRNA

>peptide 1 (39 aa)
LRERTEETTRGSGREFGSVNRSNHESITDANSSNKTTHH*

Sequence

>CNT30168852
ACCTCAGGGAAAGAACTGAGGAAACCACGAGAGGCAGCGGGCGAGAGTTCGGAAGTGTAAACAGGAGCAATCATGAGAGCATAACCGACGCCAATTCCAG
CAACAAAACGACCCACCATTAGGAACGCATAGTTTGTGGCGAAACCCATCAGCAGAGCTCCTACAAAGAATATGGCTCCCGCTAGTACGATGGTGTAGCG
CCGCCCGATCCAGTCGGAGGTTCTGCCGGCTGCCGCCGCACCAAACAGTGAGTAAAGGTTGATGATCCCCACCAGAACCTCCAATTCCACGTCGCTGATT
TTGAGGTCCTTTTTTATGTAGATTGCCGCCCCACTCATTACTCCAATGTC