Detailed information on CNT30704002


BLAST search results

BLAST vs Swiss-Prot:
sp|Q03684|BIP4_TOBAC, E-value = 3e-15

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30317640Prunus aviumCorylus avellana42.7938.285.3989forward
CNT30161023Prunus aviumPistacia vera20.1913.9592.8642reverse complement
CNT30646801Prunus aviumRosa chinensis31.2511.387.6965forward
CNT3024414Prunus aviumPopulus trichocarpa55.7738.0381.03116forward

Expression of CNT30704002

Peptides detected in this lncRNA

>peptide 1 (34 aa)
CESNIRRSGPVALIIHYNFYTIMLPHSHARVCCP*

Sequence

>CNT30704002
TTTGTGAAAGCAACATAAGAAGGAGTGGTCCTGTTGCCCTGATCATTCACTATAACTTCTATACTATCATGCTGCCACACAGCCACGCAAGAGTATGTTG
TCCCTAGGTCAATCCCGATTGCATGGCCCGCTCCCGCCATTGTCAGCCAAAAGAAAACTCTGAAGATCAAAATCCCACAGCCTCGCTCAGTTGGGTTTTA
GGGAATTT