Detailed information on CNT30317640


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9C7X7|HSP7N_ARATH, E-value = 1e-19

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30704002Corylus avellanaPrunus avium38.242.7985.3989forward

Expression of CNT30317640

Peptides detected in this lncRNA

>peptide 1 (51 aa)
RRRPVALIVHYDLYPIMQPHCHARVRRPQINPYRWALSFAGHSRIPEGSRN*

>peptide 2 (52 aa)
MTSTRSCSHTATHEYVVPRSIPIAGPSLSPAILESQKDHETEVDDRLKMITL*

Sequence

>CNT30317640
CGGCGTCGTCCTGTTGCCCTGATCGTTCACTATGACCTCTACCCGATCATGCAGCCACACTGCCACGCACGAGTACGTCGTCCCCAGATCAATCCCTATC
GCTGGGCCCTCTCTTTCGCCGGCCATTCTCGAATCCCAGAAGGATCACGAAACTGAAGTAGATGACAGGTTGAAGATGATCACTTTATAGGACTTTTGCT
TCCTTGCTCAAGAAGTAGACACAGTTTTCAAAA