Detailed information on CNT30646801


BLAST search results

BLAST vs Swiss-Prot:
sp|P09189|HSP7C_PETHY, E-value = 3e-61

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30535611Rosa chinensisEucalyptus grandis45.0410.380.69259forward
CNT30712935Rosa chinensisMalus domestica golden14.9636.2993.0286forward
CNT30424411Rosa chinensisPapaver somniferum44.73278.99257forward
CNT30704002Rosa chinensisPrunus avium11.331.2587.6965forward

Expression of CNT30646801

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MKLMEFVGFLMIWLSAASPANVSVSVKAT*

>peptide 2 (39 aa)
MDEISSAEYCFFWPMWVTTIIGLSSGPSMTLNGQSFISL*

>peptide 3 (32 aa)
MAAAVGSLIMSITFRPAVMAALLVAFRCESLK*

>peptide 4 (44 aa)
HGSLSIPTGLLVKAISDGCSSWFIDHEHHLQASCDGSTFGSIPL*

Sequence

>CNT30646801
TCACGGTTCTCTTTCTATACCAACTGGCCTTCTTGTCAAGGCCATAAGCGATGGCTGCAGCAGTTGGTTCATTGATCATGAGCATCACCTTCAGGCCAGC
TGTGATGGCAGCACTTTTGGTAGCATTCCGCTGTGAGTCACTGAAGTAAGCAGGGACTGTGATAACTGCATTTTTAACAGTTGAACCGAGGTAGGCCTCA
GCAATCTCCCGCATCTTTGAGAGGACCATGGATGAGATATCTTCGGCAGAATACTGTTTCTTTTGGCCCATGTGGGTAACCACAATCATAGGCTTATCAT
CAGGACCTTCAATGACCTTGAATGGCCAGAGCTTTATATCACTTTGAACAGAAGCATCACTGAATCTCCTACCAATTAAACGCTTTGCATCTGAAATTGG
CTAAAACAAAAATCTATGAAATTGATGGAGTTTGTAGGGTTTCTGATGATCTGGTTGAGTGCTGCATCACCTGCAAACGTTTCAGTATCAGTGAAGGCCA
CTTGAGATGGAGTAGTCCTGTTGCCCTGATCATTCACTATGACTTCTACATGATCATACTGCCATACCGCCACAC