Detailed information on CNT30161023


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30704002Pistacia veraPrunus avium13.9520.1992.8642reverse complement

Expression of CNT30161023

Peptides detected in this lncRNA

>peptide 1 (40 aa)
KNVSSLENGDEKVISVLTLTAHSRDGLLLAPSLFNRAKSL*

>peptide 2 (39 aa)
MATEEEGPAIGIDLGTTYSCVAVWKNDRVEIIANEQGNRT

>peptide 3 (51 aa)
MATKKLSPYSLSQRTLGTVYSWRHLYLTELNHSKNRIFTFESGRSSRLNKK*

Sequence

>CNT30161023
ATAAAAATGTGTCTTCTTTAGAGAATGGCGACGAAAAAGTTATCTCCGTACTCACTCTCACAGCGCACTCTCGGGACGGTTTACTCTTGGCGCCATCTTT
ATTTAACAGAGCTAAATCACTCTAAAAATCGTATTTTTACATTCGAAAGTGGTAGAAGTTCACGTTTAAACAAGAAATAATGGCTACAGAGGAAGAGGGA
CCTGCAATCGGAATTGATCTAGGGACTACATACTCTTGCGTGGCAGTATGGAAGAATGACAGAGTTGAGATCATAGCCAATGAACAAGGCAACAGGACGA
C