Detailed information on CNT30680882


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30694998Triticum urartuOryza sativa37.922.6989.23130forward
CNT30372941Triticum urartuArabidopsis thaliana20.417.3287.1470forward
CNT30290454Triticum urartuTriticum aestivum52.7783.897.79181forward
CNT30236483Triticum urartuBrassica oleracea21.578.2287.8474forward
CNT30117183Triticum urartuOryza nivara37.919.2389.23130forward

Expression of CNT30680882

Peptides detected in this lncRNA

>peptide 1 (54 aa)
CTHESLREIDLLVHPSSCTNQRNTHACPRSVSTRCIPEEISIKLAGRSCIFMRR*

>peptide 2 (88 aa)
MHALDRSLHGASLRKFPLNSPVGRVYLCDAEGSCGVLDELLGALEPPLVSGLRLADVELAVGDGGGDELVLPSLLSSTFAVATASDSNP

Sequence

>CNT30680882
TGTGCACACATGAATCCTTGAGGGAAATCGACCTCTTAGTTCATCCATCCTCATGTACAAATCAAAGAAACACACATGCATGCCCTCGATCGGTCTCTAC
ACGGTGCATCCCTGAGGAAATTTCCATTAAACTCGCCGGTCGGTCGTGTATATTTATGCGACGCTGAAGGATCCTGCGGCGTTCTCGACGAACTTCTTGG
CGCCCTTGAACCACCTCTTGTCTCCGGCTTGCGCCTTGCAGACGTAGAGCTTGCCGTCGGCGACGGTGGCGGTGATGAGCTGGTGCTTCCCTCCCTCCTC
TCCAGCACGTTCGCCGTCGCCACAGCGTCTGACTCGAACCCAC