Detailed information on CNT30674900


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30293417Setaria viridisTriticum aestivum27.9114.5788.8972forward
CNT30363319Setaria viridisSorghum bicolor33.7216.4590.887forward
CNT3099756Setaria viridisOryza rufipogon26.7412.9794.269forward
CNT30115484Setaria viridisOryza nivara26.7413.1294.269forward

Expression of CNT30674900

Peptides detected in this lncRNA

>peptide 1 (81 aa)
WHSVSIQGRDIMQICELANTQISYQTTIPCERQWGYKKIGPHIVKKTEEEKEKWSPCIPSVTRWTPWRRPPRAASWRPWPP*

>peptide 2 (42 aa)
GIQCQFKVETSCKYVNWQIHKSHIKPQFLVNDSGDTKRLDRI*

Sequence

>CNT30674900
GTGGCATTCAGTGTCAATTCAAGGTAGAGACATCATGCAAATATGTGAACTGGCAAATACACAAATCTCATATCAAACCACAATTCCTTGTGAACGACAG
TGGGGATACAAAAAGATTGGACCGCATATAGTAAAGAAAACTGAAGAGGAAAAAGAAAAATGGAGTCCTTGTATACCTAGTGTCACACGATGGACACCTT
GGCGCCGACCTCCTCGAGCTGCTTCTTGGCGTCCTTGGCCTCCTTGAGCGCGAGGCTG