Detailed information on CNT3099756


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30674900Oryza rufipogonSetaria viridis12.9726.7494.269forward
CNT30523072Oryza rufipogonSetaria italica19.1740.3294.12102forward
CNT30293417Oryza rufipogonTriticum aestivum27.4429.5589.04146forward
CNT30363319Oryza rufipogonSorghum bicolor28.9529.1190.26154forward
CNT30115484Oryza rufipogonOryza nivara96.9998.1100516forward

Expression of CNT3099756

Peptides detected in this lncRNA

>peptide 1 (61 aa)
MDTLAPTSSSCFLASSASSLLTPSLTFLGRPSMRSLASLRARLESAVEAMGMGGVSSRFRS*

Sequence

>CNT3099756
GAATTTTCACTTCGAGTTAAGGGTGATTGACCTGACAGTAGCTTTTCTCTACTGCCATGATTAACAATTTAACAGACAGCATAATTTCACTTCAACACTA
CACCGCCATTGCACAATTCTCACCATTATGATTGCGCCAATATACAAAATCTACATTGGCAATTTAGCGCGTGGAACATCGATATCAATACAAGATGGAA
TGTGAACTAACAGATCCACATACAGAAATCTCATAGTATGAAACAACAAACCATTGTAAATATCAAAGGTGGTACACAAGATTAGGGTGAGAAAAAAAGG
GGAGTCCTAAAATTACCTAGTGTCACGCAATGGACACCTTGGCGCCGACCTCCTCGAGCTGCTTCTTGGCATCCTCGGCCTCGTCCTTGCTGACACCCTC
CTTGACCTTCTTGGGGAGGCCCTCGATGAGGTCCTTGGCCTCCTTGAGGGCCAGGTTGGAGAGCGCGGTGGAAGCCATGGGGATGGGGGGAGTGAGCTCT
CGCTTCCGGAGTTGAGGTGAGCTGCGGGAGGA