Detailed information on CNT30674842


BLAST search results

BLAST vs Swiss-Prot:
sp|P31156|METK2_PETCR, E-value = 2e-43

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30303722Setaria viridisTriticum aestivum39.5237.9590230forward
CNT3014405Setaria viridisZea mays32.1334.6394.65187forward
CNT30363315Setaria viridisSorghum bicolor39.8627.9594.83232forward
CNT30574675Setaria viridisOryza barthii29.938.5893.1174forward
CNT30725876Setaria viridisLupinus angustifolius21.4812.6183.2125forward

Expression of CNT30674842

Peptides detected in this lncRNA

>peptide 1 (38 aa)
TDSKKGEKQKRKKIPDDQTSTGKDQRVILAATPNYTNH*

>peptide 2 (42 aa)
MVIIPGLKSKFSFTILRISLSGILPVPYESTNTDRGSGTPMA*

Sequence

>CNT30674842
ACAGACTCGAAAAAGGGGGAGAAACAAAAGAGGAAAAAGATACCGGACGACCAAACTAGTACAGGTAAAGACCAGCGCGTAATCCTGGCTGCCACACCAA
ATTATACCAATCACTAAGCCGCCGGGCGGCGACATGGCTTTGCTGCAGCAATTGCCAAAGCCTTCTTATCTTCTTCTGCATCTTCTTCTTCTTCTAAGGA
AGCAGCCAGTCACTCACTGATCAGACACACATCCACGAGCAGGAGCAGCAGCAGCAGCAGTGCTTGCGGGTAACATCAGCAGCAAGAGGTTGATGGTGAT
CATCCCGGGCCTGAAGTCGAAGTTCTCCTTCACGATCTTGAGGATCTCCTTGTCGGGGATCTTGCCGGTGCCGTACGAGTCGACGAACACCGACAGGGGC
TCGGGAACGCCGATGGCGTAGGACACCTGCACGAGGCAGCGGCGGGCGAGGCCGCTGGCCACGATGCTCTTGGCCGCCTGCCTGGCGATGTAGGCGCCGC
TGCGGTCAACCTTGGTGAACAGGAAGCTCTCCGCCGCCATTGCTGCTGCTGCCTTCTCGGGTAGATTACTCCACCAACCTCT