Detailed information on CNT30671790


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30690438Setaria viridisOryza sativa40.1825.2883.3390forward
CNT30300817Setaria viridisTriticum aestivum32.597.4990.4173forward
CNT30589867Setaria viridisMusa acuminata24.119.2388.8954forward
CNT30451061Setaria viridisSaccharum spontaneum41.079.4291.392forward
CNT30345634Setaria viridisEragrostis tef41.5221.6388.1793forward
CNT30102461Setaria viridisOryza rufipogon25.898.0189.6658forward

Expression of CNT30671790

Peptides detected in this lncRNA

>peptide 1 (40 aa)
MKMPPLLQTTRAHPMAVELGTRPSPLLDERFALVCRRVCGA

Sequence

>CNT30671790
ACGATGAGTTGAAACTATAGGCATGCAGGACTCATATCCAGCTCAGCCTTAGTAGGGGCTCTGTCCGGCGTAGTTGCCCGGCGGGCTGTAGTTGCAGGTG
ATGAAGATGCCGCCGTTGTTGCAGACGACGCGAGCGCATCCGATGGCGGTGGAGCTAGGCACGCGACCTTCTCCATTGCTAGATGAGCGGTTTGCGCTTG
TATGTCGTCGTGTGTGTGGTGCAT