Detailed information on CNT30660461


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30183145Triticum dicoccoidesSecale cereale73.33992.56484reverse complement
CNT30286609Triticum dicoccoidesTriticum aestivum707.1191.56462forward
CNT30219749Triticum dicoccoidesHordeum vulgare655.0385.55429forward
CNT30438383Triticum dicoccoidesAegilops tauschii84.396.1890.84557forward

Expression of CNT30660461

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MVCRSFKSTSIPSNHCNLHNLQIILLGNIL*

>peptide 2 (32 aa)
CPELELHGLAGGPIFCLSVAVPSFSTFLIELA*

>peptide 3 (28 aa)
MQIFFSPEHDMIVRSSCPNLCSVHGVRSV

>peptide 4 (29 aa)
LSRIGITRSSGRSYILPQRGSSFFLNLPY*

>peptide 5 (46 aa)
MQRCMNLRIIRSFRLMAHPTTEKDSCLGFCSCPSCGCRSFLAQSMI*

Sequence

>CNT30660461
GTTGTCCAGAATTGGAATTACACGGTCTAGCGGGCGGTCCTATATTTTGCCTCAGCGTGGCAGTTCCTTCTTTCTCAACCTTCCTTATTGAACTCGCATG
ACATTAGGTTTTATCTGCCTTAGTCGGTAATTCTCAGCTCTTGCAGATACTGACATAGAAAGGTACTGCAGTTTGGAACTGGTGGTGTTGTCGTCCGTCA
ACCATAGCTGAACTTCCTATCCAAGACAGGCTTACTTGTTCCCGCCTATCGTTTGGTCCATGCTTTAGCTATTTATAAGCAACATTTTCCCCTAACTGAA
ATTTTATAGAAAGGTCTCTTTCTTGTTGCAGGTTGTAGTTGACGAAACTCGAGCCCAACTTGATGGTTTGCAGATCTTTTAAATCTACTAGTATACCTTC
AAATCATTGCAACTTACATAACCTACAAATTATCTTACTAGGCAATATTTTATAATACAGATTCATATGCAAAGGTGCATGAATCTAAGGATAATCCGAA
GCTTTCGACTAATGGCGCATCCTACAACCGAGAAAGACTCTTGCCTAGGTTTTTGCTCCTGCCCTTCCTGTGGATGCAGATCTTTTTTAGCCCAGAGCAT
GATATGATAGTTAGGAGTTCGTGCCCAAACCTTTGCTCTGTACATGGAGTCAGGTCAGTG