Detailed information on CNT30183145


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30286609Secale cerealeTriticum aestivum28.123.2792.331512reverse complement
CNT30219749Secale cerealeHordeum vulgare24.7615.6380.711332reverse complement
CNT30438383Secale cerealeAegilops tauschii45.7127.2690.522459reverse complement
CNT30660461Secale cerealeTriticum dicoccoides973.3392.56484reverse complement

Expression of CNT30183145

Peptides detected in this lncRNA

>peptide 1 (38 aa)
MTSDFSYKIVKYTCNDQKTMMPNHFGESCSTSKTCEQI*

>peptide 2 (30 aa)
MFKLSPSDNLYVEQIAMNWKGVRFRRSSNR*

>peptide 3 (40 aa)
MNSPNIIGILRSFFKESQAIIRTGCSRRLVYPERSSQTSF*

>peptide 4 (38 aa)
MQQKTRLSRTKFPNKLLELFTSADRFKYKNLTANWFSS*

>peptide 5 (44 aa)
NQLFQLSIQATPSTKGKKYLHSNCTKNHKTDTGAQTKKAINSTT*

>peptide 6 (44 aa)
MGSTDNKVNHRKVTYFEWLPAWLDQCYKQKATKTTVVSSGDNSA*

>peptide 7 (47 aa)
MRDPVNQCDQTWETDLPQVPFNILLYTIGSYMSRPDPVLQANSWRWR*

>peptide 8 (46 aa)
MERNLYLIIKKVGFQPVRHGILQKSPSTSEKSTRSPILSQNESFFS*

>peptide 9 (29 aa)
MHGLCIMCGICIAGVKTQRQISNFSCQGN*

>peptide 10 (47 aa)
MNSKANLNPFDSSLHNILHLKEHKHIPQARSAVTMRTSSPHIKGQRY*

>peptide 11 (52 aa)
MNPQPCRHDQNSNLKLKIQSEELKNIHESPKPLSFNIHCLVSKLLKEQMGIP*

>peptide 12 (74 aa)
MKQTDYLQDTDLTPCTEQRFGHELLTIISCNPHLQKTNRTRKSRIKGKQIKQRRARSQTKILEQTPRHYPHGLG*

>peptide 13 (80 aa)
MVKQNRAPSRKSTYKSNSWRTNNPYQRCCKLYLTVQTKKLNRGGSIIQTLFTTSLIPIPWLIQSTFSIQNENFSTQDNSL*

>peptide 14 (80 aa)
MQAEANVVISRMAQQKVRNQVIRCFRTVGRIRCAHYQLQTTTECKFKLKAATNTNQVTCFRIRINQKSKPPQASPSPHTN*

Sequence

>CNT30183145
AACCAATTATTTCAGCTAAGCATACAAGCCACACCATCAACCAAAGGCAAAAAATATTTGCACAGCAATTGCACAAAAAATCATAAGACAGACACAGGGG
CACAAACAAAGAAAGCTATAAATTCCACAACCTGAATGAGTGAGTAACTAATTTCTATAGTGGGGTGAGGGTGATTTAAACCTTCAATCTTGAAAATAGG
AATTCGCAGTTTTATCCCATTATTATAGGGTCAGGGGATATACTTTTGTGTCTTCAAAATCCAGGATGCATGGACTATGCATAATGTGTGGCATATGTAT
AGCTGGAGTCAAGACTCAGCGTCAAATTAGTAATTTTAGTTGCCAAGGAAACTGAAATTAGGGAGATCCCAGAAAACCGAGATTATTAGTTGAAGATCCC
ATAAACCAGATCAAATAAGCCATTAGAAGACGTTAAGATGTGTGAACGCTTTTTGTCTTCAATCCAGGAGTATGAGCTACTTGAGTTAAAAGCACACAGT
CAGCAGGAATCATCAAAATAGCCAGCTTGTTTTGCTAGTTGTCAAATTAAAAACTAGGGAGTTCTCCAGCAAACCGAAGATGCATTGAATTGAAGATATG
TAATCCAGATCCCACTGGAGAAGCACCAATGAGAAGAACATCATTTTCTGAGAATTAATTTCATGTGGAGATGACAGTAACTTAAGACATCAAGAGTAGA
GTGTTCAGGGCGAACTATTTGTTCAAGCTTCCAGTTCAGAAGCTTCATCTCTCCATTGTTTTAGACTTTTAGTATATGGCAATAATTCCTTAGCCTCTTT
CTGCATATGACATCAACATTACCCAACTACAAGTCAAGCGAGAGAGCCAGCAAACGACTAGATGGGATCTTTCTTTATCACTGAAGTTAAAAATCTGTGC
ACATAAAAAATTGATTGTGTGTCGAAAGATGATCCTAAAGAACTCACCAGGAAATAGTTAAATGAACAAACCAAGTGTGGACAAGAAAATGTAGAATAGT
AGACCGACAAATCTTTTACTGCATTCAGAGCTCATGTACATGTATTAGGCAAGCTAAAGATATTACTGCTAGAGATAAAATTATAGATACAATCAGCCTA
ATATTAAAACCCAAATTCCGGAAACAGTATGTCAACCAAGTAGTAATCTATTTCCATTGTTGAACCCTTGTTTGAGACTAAAGGAACTTCCAGTTAGGAT
ATCATTACTTCTAGCACTTTGTTGATTCGGAGCAAAAGCTGAGATCATATTCCGTCCAAACCACATGCAAGCTGAAGCAAATGTCGTTATCAGTAGGATG
GCACAACAGAAAGTCAGAAACCAAGTAATAAGATGCTTCAGGACGGTTGGAAGAATCAGATGTGCACACTACCAACTCCAAACTACCACTGAATGCAAGT
TCAAACTGAAAGCTGCCACAAATACAAATCAAGTAACATGCTTCAGGATCAGGATTAATCAGAAGTCAAAACCGCCCCAGGCTTCACCAAGTCCCCACAC
CAACTGACGTTTTGCTGAACTCCTCAATCTTCCAGTAAAACCTCCAACAGTGCCGATCAATGAACAGCCCAAATATAATCGGCATACTTAGAAGTTTCTT
CAAGGAAAGTCAGGCCATAATTAGAACTGGATGCAGCAGAAGACTCGTCTATCCAGAACGAAGTTCCCAAACAAGCTTTTAGAACTCTTCACCTCCGCAG
ATCGGTTTAAATACAAAAACTTAACAGCTAATTGGTTTTCTAGCTAACTAAATAGAAAATGTGAAGTCAGAAGGTGTCCTAACAAATTTCTCACGCAGCA
TGACATCAGACTTCTCTTATAAAATTGTCAAGTACACATGCAATGACCAGAAGACCATGATGCCTAACCATTTTGGAGAAAGCTGTTCAACATCGAAAAC
ATGTGAACAAATATAGCAAGGGAGATGGGGATAGGCCTGGTTTAGTGAAGTTAAGTTATGCACATTGGTTTGAATTATCCTCATTGTATGTCATATCTGC
ATAGAACTAAGAGTTACTGACAAGAAAGAACAATGTTTGGAATGTTAAAAGTTAACAGAGAGAAGTTTGACAAGATTGAATCACGAAGAATCTCCTAGAG
CTCTGCACCATTCCAATTATTGAGCCAAAAAGCAGTCCGGGCAAGCCTACGCTCAAATGCTGGAGAACAACCAAAAATCCAAATAATACACTCTGAACAG
AAACCAAACTGCTCACATTGAGAAATCAAAGAGGAGGCCAGAAGACGCTTATGAATCCTCAACCATGCAGGCATGACCAAAATTCCAATCTCAAACTTAA
GATACAATCTGAAGAGCTAAAGAACATCCATGAGTCACCCAAACCTCTATCCTTCAATATCCACTGTCTTGTATCTAAACTTCTAAAGGAACAAATGGGC
ATACCATAAATGGAGATAAAATTCACCTTGTATTACGTGACAGACAGAATCGTTGATTAGCCACTGGAACAAAGCTAATTTTTGCATTGAGAGCAGACCA
GACACTGACCTGACTCTACAGGGCACACCCACTAATTCCAACATATACTGTGCAAAGAACAAGCCAAGCCAACAGACCAACAGATACACATGGATGGGTA
GCACAGATAACAAAGTAAACCATAGAAAGGTAACATATTTTGAATGGCTACCAGCATGGCTTGATCAATGCTACAAGCAAAAGGCAACCAAGACAACAGT
AGTTTCTTCAGGAGATAACTCAGCATAAGATAATTTTCGGTTCTGCGCACCGAGTTTTTTCAGCTGTAGGATGTCCCATCTAGACTGAAGCCCCAGAGAA
ACCTTCGAATCTATCCAACAAATCAATCTGAATGTTCAAATTGTCTCCATCAGATAATTTATATGTTGAACAAATTGCAATGAATTGGAAAGGTGTACGG
TTTAGAAGATCTTCAAACAGATAACTCCGCATCAGGTTGACCTAAATAGTCAATTAGAACCTGCAACGACCAAGAGACCTTCTCATGACTTTTTTGCTTT
GGGGAGACGAAGCTACTTATAAACAGCTACAGTAAATAATGCATCAAAACAGTGAGGGGATAGGATAAGCCTGCTTGGCTGGGAGGGATCAGTTAGTCAA
CAACACCAGTTCCAGATAGCAAACTATATTATCTCTTGTTCATCCATGGGTCCATGTCAATATCTGTAAGGAAACGTATTTACCAAGGGCAGAGAAAACC
ATAGGAAGTAAAATTCAAAGCAAATCAGGAAATATTGAAGTCAGGAGAAGAAACCACCTGTAACATGGTGAAACAAAACAGGGCACCTTCCAGAAAGTCC
ACATATAAGTCCAATAGCTGGAGAACCAACAATCCATATCAGAGATGTTGCAAGCTATATTTGACTGTGCAAACAAAGAAACTAAATAGAGGAGGATCGA
TTATCCAAACACTGTTCACGACATCTCTGATCCCCATCCCATGGTTAATCCAATCCACATTTTCAATCCAAAACGAAAACTTCAGCACACAAGATAATAG
CTTATAACCATCCATTGAGCCATAACCAATCAAAATAACCATGAACAGTAAAGCAAACCTCAATCCTTTTGATTCATCACTCCACAACATCCTGCATCTC
AAGGAGCACAAACACATACCACAAGCAAGATCAGCTGTTACAATGAGAACCAGTTCACCTCATATCAAGGGACAACGGTACTGATGAGCCATCAGACAGA
GACAAATCGAAGAACTCAAGGTATAGCCACTTAAATCTTTCGTCACCGAGCACAGATGAGGGATCCAGTAAACCAATGTGACCAAACATGGGAAACTGAC
CTGCCGCAAGTCCCCTTCAACATACTGTTATACACCATAGGGAGCTACATGTCCAGACCAGATCCTGTCCTGCAAGCCAACTCATGGAGGTGGCGCTAAC
AAATGAAACAAACAGACTATCTACAAGACACTGACCTGACTCCATGTACAGAGCAAAGGTTTGGGCACGAACTCCTAACTATCATATCCTGCAACCCACA
CTTGCAGAAAACCAATAGAACACGGAAATCAAGAATAAAAGGTAAACAAATCAAACAACGGAGAGCTAGATCGCAAACCAAAATATTAGAACAGACTCCA
CGTCATTACCCACATGGTCTGGGCTAAAAAAATCTGCAACCACAGGAAGGGTAGGAGCAAAAACCTATATCAAAGACATGGCCAAGTAGCTAAATGAAAT
TAAAAGAAGAATGACAAGAGTCTTTCGGTTGTAGGATGTGCCATTAGTCGAAAGCTTCGGATTATCCTTAGATTCATGCACCTTTGCATATGGATCTGTA
TTATAAAATATTGCCTAGTAAGATAATTTGTATGTTATGTAAGTTGGAATGAATTGAAGGTATACTAGTAGATTTAAAAGATCTGCAAACAGATTCATCA
TCAGGTTGGGCTCGAGTTTCGTCAACTACAACCTGCAACGAGCAAGAGACCTTTCTATAAATTTTCAGTTAGGGGAAAATGTTATTTAAATAGATAAAGC
ATGGACCAAACGATGGGCGGGAACAAGTAAGCCTGTCTCGGATAGGAAGTTCAGCTATGGTTGACGGATGACAACACCACCAGTTCCAAACTGCAGTTAT
ATATCCTATGTCAGTATATGCAAGAGCTGAGAATTACCGACTAAGGCAGAGAAAACCTAATGTCATGAGAGTTCAATAAGGAAGGTTGAAAAAGTTTGAG
CCACCGAAGGAACCGCCATGCTGAGGCAAAATAGGACCGCCTGCTAGGCCACGTAATTCCAATTTCTGGACAACCATCAACAGATCAGTCAGAATTGTTG
GGAGACTAATTGAACACTGGAGAAGATATTAAACTGAGTAGGTAATGATCATCCACTGCAGATCACCAAGACGATAGGTGCTCCCGCTAAGCCGTATAAC
CTCAATTTCTGAAGAACCACCAACAAATGCAAATCAGGATTGTCCTAGACTGAAGGTGAGCTATGGAGAGAAATCTTTACCTAATAATAAAGAAAGTTGG
GTTTCAGCCCGTCCGTCATGGCATTTTGCAGAAAAGTCCCTCCACTTCAGAGAAATCAACCCGCAGTCCTATTTTAAGTCAAAACGAATCGTTTTTTTCG
TAGTTTACACAAAAGACCCTGTGTTTTCTTGAAATCAACCCGCAGTCCGGATTTAAGTCATACCCGAACCGTTATTTTACAATTTTCGAAACCCCCCCTG
ATGTTTTAGGTAATTTATCCGCGGATCATATTTAAGTCAAATACATGTTTTTTTAAATCATCCATATCTTTTAAACCGTAACTCCGATTTGAACATGTTA
TATATGAAATTTGATTAGAAAAATATGTAGAATATGAATATGAGATTAATTTACCTGTTAAGTATTTTTAAATATTATTT