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Detailed information on CNT30659171


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30190201Triticum dicoccoidesSecale cereale98.689994.63298reverse complement
CNT30305911Triticum dicoccoidesTriticum aestivum98.3498.3496.63297forward
CNT30398547Triticum dicoccoidesTriticum turgidum99.0198.0395.32299reverse complement
CNT30554032Triticum dicoccoidesOryza glaberrima100.9963.6784.92305forward
CNT30443982Triticum dicoccoidesAegilops tauschii80.13101.6895.04242forward
CNT30687150Triticum dicoccoidesTriticum urartu99.0193.4495.32299forward
CNT30576754Triticum dicoccoidesOryza barthii100.9981.1284.92305reverse complement

Expression of CNT30659171

Peptides detected in this lncRNA

>peptide 1 (44 aa)
MWQAQREAGFTEQRQLPASNGERITGRCTAGPFGPRSLLQQTTTF

Sequence

>CNT30659171
GCCGAGTTCAGTAGCGTGAGCTTGTAACCCGAGCGGGGGCGTTAAGGTGGTGTGGATGTTGCCGTAGCGCTGTGGGCCTGGTCCAGTTGTGCTACTGCTG
GCCCGCCCGTTCCAAGTTGGTAGTGGACCGCTGGGGCCTGTGCGAAAGCTGGGCCTCACGGGCCGTAATGTGGCAGGCACAGCGTGAGGCTGGCTTCACA
GAGCAGCGACAACTGCCCGCTTCCAACGGTGAAAGGATAACGGGCCGCTGCACAGCTGGGCCATTTGGGCCTCGCAGCCTACTCCAACAAACCACCACTT
TT