Detailed information on CNT30443982


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30190201Aegilops tauschiiSecale cereale99.5878.7494.09237reverse complement
CNT30305659Aegilops tauschiiTriticum aestivum101.6879.8795.45242forward
CNT30398547Aegilops tauschiiTriticum turgidum101.6879.3495.87242reverse complement
CNT30659171Aegilops tauschiiTriticum dicoccoides101.6880.1395.04242forward
CNT30687150Aegilops tauschiiTriticum urartu101.6875.6295.87242forward

Expression of CNT30443982

Peptides detected in this lncRNA

>peptide 1 (40 aa)
PSSVARACNPSGGFKVVWMLPWRCGPGPVVLLLARPFQVE*

Sequence

>CNT30443982
GCCGAGTTCAGTAGCGCGAGCTTGTAACCCGAGCGGGGGCTTTAAGGTGGTGTGGATGTTGCCGTGGCGCTGTGGGCCTGGTCCGGTCGTGCTGCTGCTG
GCCCGCCCGTTCCAAGTTGAGTAGTGGACCGCTGGGGCCTGTGCGAAAGCTGGGCCTCACGGGCCGTAATGTGGCACAGCGTGAGGCTGGCTTCACAGAG
CAGCGACAACTGCCCGCTTCCAACGGTGGAAGGATAAC