Detailed information on CNT30657847


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30180525Triticum dicoccoidesSecale cereale70.172.8693.63204forward
CNT30290797Triticum dicoccoidesTriticum aestivum71.1372.1395.17207forward
CNT30133222Triticum dicoccoidesLolium perenne23.027.498.5167forward
CNT30680271Triticum dicoccoidesTriticum urartu72.5165.9495.73211forward

Expression of CNT30657847

Peptides detected in this lncRNA

>peptide 1 (43 aa)
MQPRHSSAPCRRKAGARRGGQARGGLVEEAGGGRHCSLLFSLA*

>peptide 2 (61 aa)
MAAAPARRDSAARRLVTTAASDAASSFFCALQTKSWGAPRRPGARWTGGGSRRWTPLLAAV*

>peptide 3 (77 aa)
CFSVGGGGGGDLDGDGGGTGEEGQRGAPAGDDGSVRCSLVILLRLADEKLGRAEAARRAVDWWRKQEVDAIARCCLA*

Sequence

>CNT30657847
CTGCTTCTCCGTAGGCGGCGGCGGCGGGGGAGACCTTGACGGCGATGGCGGCGGCACCGGCGAGGAGGGACAGCGCGGCGCGCCGGCTGGTGACGACGGC
AGCGTCAGATGCAGCCTCGTCATTCTTCTGCGCCTTGCAGACGAAAAGCTGGGGCGCGCCGAGGCGGCCAGGCGCGCGGTGGACTGGTGGAGGAAGCAGG
AGGTGGACGCCATTGCTCGCTGCTGTTTAGCTTAGCTTAGGCAGGACTGTGCGTGAGTGGCGTGGGTATGGTGTGTGTCGCGTTAACTAAG