Detailed information on CNT30290797


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30180525Triticum aestivumSecale cereale100.35102.8694.1288forward
CNT30657847Triticum aestivumTriticum dicoccoides10098.6395.47287forward
CNT30132420Triticum aestivumLolium perenne70.3832.6982.67202forward
CNT30349044Triticum aestivumEragrostis tef29.9728.8689.5386forward

Expression of CNT30290797

Peptides detected in this lncRNA

>peptide 1 (80 aa)
CFSVGGSGGGDLDGDGGRTGEEGQRGAPAGDDGSVRCSLVALLRLADEQLGRAEAARRAVDWWRKQEVDAIARALLFSLA*

>peptide 2 (41 aa)
MQPRRSSAPCRRTAGACRGGQARGGLVEEAGGGRHCSRAAV*

Sequence

>CNT30290797
CTGCTTCTCCGTAGGCGGCAGCGGCGGGGGAGACCTTGACGGCGACGGCGGCCGCACCGGCGAGGAGGGACAGCGCGGCGCGCCGGCTGGTGACGACGGC
AGCGTCAGATGCAGCCTCGTCGCTCTTCTGCGCCTTGCAGACGAACAGCTGGGGCGTGCCGAGGCGGCCAGGCGCGCGGTGGACTGGTGGAGGAAGCAGG
AGGTGGACGCCATTGCTCGCGCGCTGCTGTTTAGCTTAGCTTAGGTAGGACTGTGCGTGAGTGCGCGTGGGTATGGTGTGTGTCGCG