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Detailed information on CNT30620782


BLAST search results

BLAST vs Swiss-Prot:
sp|P00865|RBS1_SOYBN, E-value = 3e-69

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30712674Cajanus cajanGlycine max25.7244.4388.73275forward
CNT30153087Cajanus cajanPrunus persica5.5225.3291.5359forward
CNT30705711Cajanus cajanPrunus avium13.6628.0885.62146forward
CNT30176199Cajanus cajanVigna angularis40.631.5685.02434forward
CNT30725168Cajanus cajanLupinus angustifolius12.7220.1584.56136forward

Expression of CNT30620782

Peptides detected in this lncRNA

>peptide 1 (43 aa)
HTNKAYSLVLIHSFPVKSENRKPNYRMKSQKAKTKAKANGNLV*

>peptide 2 (91 aa)
MGIWFKYKQTKQGGYKWFANFSYLDAWWLVGNERDALHLANVVESNDTDERVGVFLLGLLNLLQHLRRICAAKHRQLPHGPVASIIESILS*

>peptide 3 (87 aa)
MITCLTCMHCTLPPLFAMVVMSLLVFLVGKPAKDLRPVNGATMPAPARLTVVTAGEEIIEEAISFSFLVLLVLVLLDCHAYAQTCYI*

Sequence

>CNT30620782
TCCACACCAATAAAGCTTATTCATTAGTTCTCATCCATTCATTTCCAGTGAAGTCCGAAAACAGAAAGCCAAATTACAGGATGAAATCTCAAAAAGCAAA
AACAAAAGCAAAAGCAAATGGGAATTTGGTTTAAGTACAAACAAACAAAGCAGGGCGGCTACAAATGGTTTGCAAATTTTTCATACTTAGACGCCTGGTG
GCTTGTAGGCAATGAAAGAGATGCATTGCACTTGGCGAACGTTGTCGAATCCAATGATACGGATGAAAGAGTTGGGGTATTCCTTCTTGGCCTCTTGAAC
CTCCTTCAACACCTGAGAAGAATCTGTGCAGCCAAACATAGGCAGCTTCCACATGGTCCAGTAGCGTCCATCATAGAATCCATCCTTTCCTGAGAAGGTA
GTCTACTTCCTTGCCCAATTCAGCATCACTGAGGGGTGGCAGGTAGGAAAGAGTCTCGAACTTCTTCTTGCCAAGTGGAGGCCACACCTAGTAATTTGCA
TGGAAATTGAGTAAAGGGGTTAACAAACTTGCAGTTGTGGCACATTTTCCTGTAGCTAACATGTTAATTCGAGTAAACTTTTGGATGTAACATGAATTTT
AATCATCTTGGTGCCTCTTGTGTGTGTATATGATAACTTGTCTTACCTGCATGCATTGCACTCTTCCACCGTTGTTTGCAATGGTGGTAATGTCATTGTT
GGTCTTCCTGGTGGGGAAGCCAGCCAAGGACTTGAGACCAGTGAATGGAGCAACCATGCCGGCACCGGCACGGTTGACGGTGGTAACAGCGGGGGAGGAG
ATCATTGAGGAGGCCATTTCCTTCTCCTTCTTAGTTCTACTTGTGCTTGTGCTGCTAGATTGCCATGCTTATGCTCAAACTTGCTATATATAAGGATGTG
GTTTGTGTAGTTCTAATCGAATGGTGTGTAATAGAGGGGATTGGTTGATCACAAGTTGCAACCGTTGGATTGTCTAAGTGATGACATTGCAGCATATTGG
CCACACGAGTGAGGAAAATTTTGAATGGAAGCCTTATCGTTAGGTACCATGTGGAAGTGACACGTGGAC