Detailed information on CNT30153087


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30317080Prunus persicaCorylus avellana42.4926.5484.8599forward
CNT30503348Prunus persicaNicotiana attenuata21.892590.251forward
CNT30166289Prunus persicaPistacia vera40.7746.5782.1195forward
CNT30648337Prunus persicaRosa chinensis25.7513.0493.3360forward
CNT30715955Prunus persicaMalus domestica golden25.7521.7491.6760forward
CNT30620782Prunus persicaCajanus cajan25.325.5291.5359forward
CNT30705707Prunus persicaPrunus avium70.8214.6498.79165forward
CNT3030395Prunus persicaTheobroma cacao30.042885.7170forward
CNT3038940Prunus persicaCucumis melo23.6111.2289.0955forward

Expression of CNT30153087

Peptides detected in this lncRNA

>peptide 1 (39 aa)
LGQRLRREWWKVGESLELLQSNLVLPSCIALFHHCLQWR*

>peptide 2 (73 aa)
PWPKTQERVVEGRRESRTSSVQLSLTFMHCTLPPLLAMEVMSLVFLAPGKAEADLRPVNGATKLACAGAARSA*

Sequence

>CNT30153087
CCTTGGCCAAAGACTCAGGAGAGAGTGGTGGAAGGTAGGAGAGAGTCTCGAACTTCTTCAGTCCAACTTAGTCTTACCTTCATGCATTGCACTCTTCCAC
CATTGCTTGCAATGGAGGTGATGTCATTGGTCTTCTTGGCGCCGGGGAAAGCTGAGGCAGACTTGAGGCCAGTGAATGGTGCAACCAAGCTAGCTTGTGC
CGGGGCGGCACGGTCAGCGTAAACCGAAGCCAC