CANTATAdb - search

Detailed information on CNT30176199

BLAST search results

BLAST vs Swiss-Prot:
sp|P00865|RBS1_SOYBN, E-value = 2e-76

BLAST vs NONCODE:
NONMEST000023, E-value = 1e-24

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30620782	Vigna angularis	Cajanus cajan	31.56	40.6	85.02	434	forward

Expression of CNT30176199

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MAKLLLLLAIYNSVICSVLIQWFQMEGICS*

>peptide 2 (70 aa)
MHCTLPPLFATEVMSLFVFLVGNPPKDFSPVNGATMPAPARLTVVTAGEEIIDEAISFTFLLLNHLQFCC*

Sequence

>CNT30176199
AGGAAATGCATGTTTAATGGGTTCTTGAATTATTTAAGACAAAGCAACAGAACTGCAGCAACTTTTCATTAATTCTCATCCATTCATTTCTGAAATCAGA
AGTCAAAAATATAGGATGATGAATCTCAAAAAGCAATATAACAATTGAGAATTGGTTCGATCACCAGGCTAGTTTGTATGAAGAGCATCCGTTAGGAGAT
GTCAATTCATTAAATATATCAAATATATCTCCATACATCAAGGGATTAAGCTCTAGCTTTCCACAGAAGATACTCCGGACAACAAAAAGAGAAAAGGAAA
TGGGAATTTGGTTTAAGTACAAAGCAACAAAGTGGGGTGGTTACAAATTATGGAAACTTAGTAGCCTGGTGGCTTGTAGGCAATGAAACTGATGCACTGG
ACTTGACGAACGTTGTCAAAACCAATGATACGGACGAAGCCGTCGGGGTGGGCAGTGCTGGCCTCTTGAACCTCCTTCAAAACCTGAGAAGAATCAGTGC
ACCCATACATAGGCAGCTTCCACATGGTCCAGTACCTTCCATCATAGTATCCAGTGCACCCATACATAGGCAGCTTCCACATGGTCCAGTACCTTCCATC
ATAGTATCCAGGTGACCTGTTGTTCGCACGATGTGGGAAAGCGTCCTATAAACAAACACATCATTACCATCAAAACTCAAAACTAAAATTCAACCAAAGG
GCTTCCAAGAAATTTACCGTTGCATTTAACTCGAATTCCAAGCAAGGGACCCATCCGCTCCTAAGAAGGTAGTCTACTTCCTTAGCAAGCTGTTCCTGAG
TCAGGTCTGGCAGGTAAGACAGAGTCTCGAACTTCTTCTTCCCAACTGTCGGCCACACCTACCCATTTCCATCATGATTTCAGTAACCTTTTCTATACCC
TAAACATCCATCTAACATATAATTCCAATCGATTTCTTACCTGCATGCATTGCACTCTTCCACCGTTGTTTGCAACCGAAGTAATGTCATTGTTTGTCTT
CCTGGTTGGGAACCCACCCAAGGACTTCAGCCCAGTGAACGGAGCCACCATGCCGGCACCGGCACGGTTAACGGTGGTAACAGCCGGAGAGGAGATCATT
GATGAAGCCATTTCCTTCACCTTCTTACTTCTGAATCACTTGCAGTTCTGCTGCTAGATGGCCAAGCTTCTTCTCCTTCTTGCTATATATAATAGTGTGA
TCTGTTCAGTATTAATCCAATGGTTTCAAATGGAAGGGATCTGTTCCTGACATGTTACAACCGTTGGATTCTATAAGTGATGACATTACAGCATATTGTC
CACACGAGTAAGGAAAATATTTGAATGGTAGCCTTATCGTTAGGTACCATGTGGAACTGACACGTGGAACAGGTT